Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0970 ATGGATTCAAAACCTCCATTGAAGTATCAGACATGGTTCTTGAAAGTTTCTATCCACTGTGATGGTTGCAGGAGGAAAGTTAAGAAGGTTCTACAAAGCATTGATGGTGTTTTTACAACAATAATAGACCAACAACAGCAAAAAGTAACCGTCACTGGAAGTGTAACTGTTGAAACCCTTCTCAGTAAACTTCTCAGAGCCGGTAAGCACGCCGAGATTTGGCCGGAAAATATCTCCGTCAAAGAGAACAAGAACAACACACACAAGTTGGAAAACGATAACCATTCTTATGCTGAAAAAACTACACAAAATTGTAACAAAGTTATGAGCAAGAACAGCAACATAAAACCCGGTCAAAAATCACCGGAAAAGTCTCCGGCCGGCAACCGTGAATCGCCGCAGGAGCACAAGGGTAGCCAGAGTGGTGGTGGTGGTGGTTCTGCTAAGAAGAAGAAAAAGAAAGGTCAGGGTGATGTTAGCGTGGATCATGGTTCCGCGGGTGCACCTGCACCTGCGGACGCTGGATTTGGGTTCCAGAATCAAGGGCTGGATTTTGGACGGGAAATGGGGAAAATGAATCTCATCCCTACACGTCAGAAGCAAGAAAAAGCCTTGTATACAGAAACTGGTTGTCCTCCACCGATGGTGTACGCTGGTGCTTACTACAATAGATTGTACCCCATGGGTGGTCCTTCATACTATGTTCCTCCTTATAATATCATGTGTTCGGGACTAGATCAAGAATATGGTTGTCAAATTCAATCAAGACCGTTGGTTTCCTTTGAGATTTTCAGCGATGAAAATGTGAATGGATGTTCAATTATGTGA 828 0.436 MDSKPPLKYQTWFLKVSIHCDGCRRKVKKVLQSIDGVFTTIIDQQQQKVTVTGSVTVETLLSKLLRAGKHAEIWPENISVKENKNNTHKLENDNHSYAEKTTQNCNKVMSKNSNIKPGQKSPEKSPAGNRESPQEHKGSQSGGGGGSAKKKKKKGQGDVSVDHGSAGAPAPADAGFGFQNQGLDFGREMGKMNLIPTRQKQEKALYTETGCPPPMVYAGAYYNRLYPMGGPSYYVPPYNIMCSGLDQEYGCQIQSRPLVSFEIFSDENVNGCSIM* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0970 275 PANTHER HEAVY-METAL-ASSOCIATED DOMAIN PROTEIN 101 275 - -
Ahy4g0970 275 CDD HMA 14 72 IPR006121 GO:0046872
Ahy4g0970 275 MobiDBLite consensus disorder prediction 84 181 - -
Ahy4g0970 275 Pfam Heavy-metal-associated domain 16 67 IPR006121 GO:0046872
Ahy4g0970 275 ProSiteProfiles Heavy-metal-associated domain profile. 17 73 IPR006121 GO:0046872
Ahy4g0970 275 Gene3D - 8 73 - -
Ahy4g0970 275 MobiDBLite consensus disorder prediction 97 141 - -
Ahy4g0970 275 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 5 105 - -
Ahy4g0970 275 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 101 275 - -
Ahy4g0970 275 SUPERFAMILY HMA, heavy metal-associated domain 8 75 IPR036163 GO:0046872
Ahy4g0970 275 PANTHER HEAVY-METAL-ASSOCIATED DOMAIN PROTEIN 5 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0970 Ahy-Chr4 18835590 18837339 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0970 - - mtr:MTR_4g119820 232.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1068 14 18869359 18870867 Ahy4g0970 4 18835590 18837339 hybridization
Ahy11g2550 11 141461011 141462923 Ahy4g0970 4 18835590 18837339 PCT
Ahy1g2372 1 101759615 101761570 Ahy4g0970 4 18835590 18837339 PCT
Ahy4g0970 4 18835590 18837339 Ahy11g2550 11 141461011 141462923 PCT
Ahy4g0970 4 18835590 18837339 Ahy1g2372 1 101759615 101761570 PCT