Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2372 ATGGAAGCAAAGACTCCTCGTGCTGCCTCAGAACCATTGAAGTATCAGACATGGTTCTTGAAGGTTTCCATACACTGTGAAGGTTGCAGAAGGAAAGTAAAGAAAGTTCTACGCAACATTGATGGTGTTTTCACTACAACAATTGATCCCCAGCAGCAGAAGGTTACAGTGACGGGAAGTGTTGGTGTTGAGACTCTCATAAGGAAACTGATCAAAGCTGGGAAGCACGCTGAGATTTGGCCGGAAAATGGCGCCGGAAAGGACGGGAAACCGAAGAAGAGGAACGAACAACAAAGAGATGCAGAAAGCGTGGAGAACCACCACCGTTCCCCTGCAAATGCTGAAGCAAACTCTGTCTCTGCCAAAAACAGGGGAATTGAAAATGCAGACAACTCAAGCAACAACAAGAAGAAGACCAGCGAGTCCAAAACCGGCGGCAAAAAGTCGCCGGAGAAGTCTTCGGGAGGTGGTGCCTCACCACCGGAGCAAGAGCAGAAGGGTAAGGGTGGTGGTGGTGGTGGTGAAGGTGAAGGTGAAGGTGAAGGGGATTCAGTGAAGAAGAATAAGAAGAAGAAAAAGAAGGTTCAGAGTAGTGGAATTGAAAAGAATGGGTCGAGTTCAGCATCATCAAGCGGTGCAGGTGCACACAGTGGATCAGGAGAGGGAGTGGGGCAGATGAATCTGAGCCCTACACGTCAGCAAGAATGGGCATATGCGTATCCAGAATCAGAATCTTACTACTACCCAGGAGCAGGACCTTTGGTGTACCTAGCAACATATAACAGATTTTGTCCCATGGCCATGCATGGCAAAATGGGTGGTGGTCCTTCTTACTATGTTTCACCATTGCCCTACATCTCTGCAGGTCTTGACCATGACCCTTACCACTTTCAATCTCCACCGTTGGTTCCTTTTGAGATCTTCAGTGATGACAATGCTAATGCCTGTTCTCTTATGTGA 960 0.4792 MEAKTPRAASEPLKYQTWFLKVSIHCEGCRRKVKKVLRNIDGVFTTTIDPQQQKVTVTGSVGVETLIRKLIKAGKHAEIWPENGAGKDGKPKKRNEQQRDAESVENHHRSPANAEANSVSAKNRGIENADNSSNNKKKTSESKTGGKKSPEKSSGGGASPPEQEQKGKGGGGGGEGEGEGEGDSVKKNKKKKKKVQSSGIEKNGSSSASSSGAGAHSGSGEGVGQMNLSPTRQQEWAYAYPESESYYYPGAGPLVYLATYNRFCPMAMHGKMGGGPSYYVSPLPYISAGLDHDPYHFQSPPLVPFEIFSDDNANACSLM* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2372 319 SUPERFAMILY HMA, heavy metal-associated domain 14 81 IPR036163 GO:0046872
Ahy1g2372 319 MobiDBLite consensus disorder prediction 78 227 - -
Ahy1g2372 319 CDD HMA 20 78 IPR006121 GO:0046872
Ahy1g2372 319 MobiDBLite consensus disorder prediction 78 109 - -
Ahy1g2372 319 Pfam Heavy-metal-associated domain 22 76 IPR006121 GO:0046872
Ahy1g2372 319 MobiDBLite consensus disorder prediction 199 227 - -
Ahy1g2372 319 Gene3D - 14 79 - -
Ahy1g2372 319 PANTHER HEAVY-METAL-ASSOCIATED DOMAIN PROTEIN 9 319 - -
Ahy1g2372 319 MobiDBLite consensus disorder prediction 134 148 - -
Ahy1g2372 319 ProSiteProfiles Heavy-metal-associated domain profile. 23 79 IPR006121 GO:0046872
Ahy1g2372 319 MobiDBLite consensus disorder prediction 110 133 - -
Ahy1g2372 319 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 9 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2372 Ahy-Chr1 101759615 101761570 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2372 - - lja:Lj0g3v0144089.1 271.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2550 11 141461011 141462923 Ahy1g2372 1 101759615 101761570 hybridization
Ahy1g2372 1 101759615 101761570 Ahy14g1068 14 18869359 18870867 PCT
Ahy1g2372 1 101759615 101761570 Ahy4g0970 4 18835590 18837339 PCT
Ahy14g1068 14 18869359 18870867 Ahy1g2372 1 101759615 101761570 PCT
Ahy4g0970 4 18835590 18837339 Ahy1g2372 1 101759615 101761570 PCT