Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0940 ATGGTTGCCGTCGAGAAAACCTCCAAGCCATACCCTACAACCGCAGAGGTAGTGGATGAGGTAAAGAGAATGGCAGACATAGGTTTCCCAATAGCAGCCATGAGCCTAGTGGGATACCTCAAGAACATGATCATGGTTGTATGCATGGGAAGGCTCGGGAGCCTCGAGTTAGCCGGTGGTGCTTTAGCCATCGGCTTCACAAACATCACCGGCTACTCCGTTCTCTCAGGCCTAGCCATGGGCATGGAGCCGCTTTGCACCCAAGCCTTCGGTTCTAGAAACTTCTCCTTAGTCTCCATCACAATGAAACGAACCATCCTAATGCTACTCCTAGCATCCCTACCCATTTCAATCTTGTGGCTAAAGCTTGAACCTTTGATGCTTTGCCTCCATCAAGATTCTGAAATAACACGAATTGCAAGCGTCTATTGCTTCTATTCTATCCCTGACCTCATTGCTAATAGCTTCCTTCACCCTATACGTATTTTTCTACGTAGCAAAGGTACAACTTGGCCTCTAATGTGGTCCACTTTCTTCTCCATTCTCATACATGTTCCAGTACTCGCTTTCTTCACCTTCAAACTCAACCTTGGTGTTCCCGGGATCGCGGTTTCGGCTTTTGTCGCAAATTTCAACACACTTTTGTTTCTTCTATCATACATGGTATACACAAATATCTCAAACAACAATAAAGATTCGTCGTCGTTGTCGCTTTTTTGTCCCTTGTCACAATCTCAAAAGGTTGTCCATGGTGATGCTATCTTCAATAATTCCTGTCCAACAACTTTGAGTCGCAAAGAATGGGGGATGTTGATAAGATTTTCGATACAAAGTTGTCTTGGCGTGTGTTTGGAATGGTGGTGGTACGAGCTAATGACGATTCTAGCGGGTTATCTTTATAACCCGCGTGTGGCTCTGGCAACCGCCGGCATAGTGATACAGACAACTTCGTTGATGTACACTCTGCCGATGGCGCTGAGCGCGTCCGTTTCCACTCGGGTTGGAAACGAACTGGGCGCGGGTCAACCCGAAAGGGCGAGCTTGTCCACGATGGTGGCCATAGGAATGGCACTAGCAAGCTCAGTGTTGGGATTATTATGGACCACTCTAGGGAGAGAGGAATGGGGTAGGGTTTTCACAAGTGATAGTGAAGTGTTGGAACTTACAATTACGGTTTTGCCCATAATTGGATTATGTGAGATTGCAAATTGTCCACAAACAACAAGCGTTGGAATCCTTAGAGGGAGTGCTAGGCCTGGGGTTGGAGCTGGAATCAACTTCTATTCTTTCTACTTGGTTGGGGCACCCGTGGCAATTGTTTTGGGGTTTATTTGGGAATTAGGGTTTGTGGGAATGTGTTATGGATTGCTATCGGCTCAGGTGGCTTGTGTTGTTTCCATCCTTCTTGTTGTGTATAACACCGATTGGGAAATGGAGGCGTTGAAAGCCAAAAGTTTGGTTGGAATTGGTTATGGTGGTTCGCTGTCACGTGACACAAATCATCATGGTTGTCGTCCACAACACCAAACAGTCAAATGTGAAGAATGTGTTGTCTTTATCCCTCACCACGGACAACATCAACAACAACCCAAACTCATTAATTGA 1605 0.4611 MVAVEKTSKPYPTTAEVVDEVKRMADIGFPIAAMSLVGYLKNMIMVVCMGRLGSLELAGGALAIGFTNITGYSVLSGLAMGMEPLCTQAFGSRNFSLVSITMKRTILMLLLASLPISILWLKLEPLMLCLHQDSEITRIASVYCFYSIPDLIANSFLHPIRIFLRSKGTTWPLMWSTFFSILIHVPVLAFFTFKLNLGVPGIAVSAFVANFNTLLFLLSYMVYTNISNNNKDSSSLSLFCPLSQSQKVVHGDAIFNNSCPTTLSRKEWGMLIRFSIQSCLGVCLEWWWYELMTILAGYLYNPRVALATAGIVIQTTSLMYTLPMALSASVSTRVGNELGAGQPERASLSTMVAIGMALASSVLGLLWTTLGREEWGRVFTSDSEVLELTITVLPIIGLCEIANCPQTTSVGILRGSARPGVGAGINFYSFYLVGAPVAIVLGFIWELGFVGMCYGLLSAQVACVVSILLVVYNTDWEMEALKAKSLVGIGYGGSLSRDTNHHGCRPQHQTVKCEECVVFIPHHGQHQQQPKLIN* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0940 534 PANTHER PROTEIN DETOXIFICATION 55 12 492 - -
Ahy4g0940 534 CDD MATE_eukaryotic 20 482 IPR045069 GO:0042910|GO:1990961
Ahy4g0940 534 PANTHER MULTIDRUG RESISTANCE PROTEIN 12 492 - -
Ahy4g0940 534 Pfam MatE 30 187 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ahy4g0940 534 Pfam MatE 279 439 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0940 Ahy-Chr4 17492214 17494958 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0940 K03327 - gmx:100785533 790.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1032 14 17903211 17905791 Ahy4g0940 4 17492214 17494958 hybridization
Ahy11g2572 11 141758773 141760659 Ahy4g0940 4 17492214 17494958 PCT
Ahy1g2348 1 101506685 101508556 Ahy4g0940 4 17492214 17494958 PCT
Ahy4g0940 4 17492214 17494958 Ahy11g2572 11 141758773 141760659 PCT
Ahy4g0940 4 17492214 17494958 Ahy1g2348 1 101506685 101508556 PCT