Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2348 ATGGTTAATCGAGAGCAGAACCCTCTTCAGAACACATCATCATACCCGACAATTTCCGAGGTATTGGAGGAAATAAAGAGAATAACCGACATAGGGTTGCCAATATTAGCCATGAGCCTGGTTGGTTACCTGAAGAACATGAGCTTAGTGGTTTGCATGGGAAAATTGGGAAGCCTGGAGTTAGCCGCTGGAGCTTTGGCAATTGGGTTCACCAACATAACCGGTTACTCGGTTCTCTCCGGTCTAGCCATGGGCATGGAACCGCTCTGCACCCAAGCCTTTGGTTCTAGAAACTTCTCATTACTGTCTATCACTTTACAAAGGACAATCCTTATGCTCTTGCTCTTCTCTCTCCCCATCTCTCTCTTGTGGCTCAACCTCGAACCCTTCATGCTCTGCCTTCACCAGAACCCCAACATAACACGTGTCGCAAGCATATATTGCCGCTTCGCCATCCCTGACCTCCTTGCCAACAGCCTCCTCCACCCTCTTCGCATTTACCTCCGTAGCAAAGGGACAACATGGCCATTAATGTGGTGCACCTTACTTGCTATTCTCCTCCACCTTCCCATCATCATTCTTTTGACCTTCAAGCTTCACCTTGGCGTCGCCGGAGTCGCCATATCATCCTTCCTTGCCAACTTCAACACTCTCTTCTTCCTCCTTCTCTACATGTACTACACCTCTGTCTCCCAAGAATTATCCCTAGCCCTGCCATTGATTAAGGGAGCACACCATGTTGGAGACGCCACGCTTAACTTCATCAAGGAATGGGCCATGCTACTCAAGTTCTCCATACAGAGTTGTCTCGCTGTGTGCTTGGAATGGTGGTGGTACGAATTCATGACAATCATGGCAGGCTACCTTTACAACCCTCGCGCATCGCTCGCCACCGCCGGCATAGTGATACAAACGACATCTCTTTTGTACACTCTACCGACGGCGCTCAGCGCGTCTGCGTCCACGAGGGTTGGCAACAAACTCGGAGCAGGGCAACCCGAAAGGGCGAGCTTGTCGACGGTGGTAGCCATAGGGCTATCACTGGCAAGCTCGATCTTGGGGTTGCTCTGGACCACAATAGGGAGAGAGAGATGGAGCAGAGCGTTCACAGATGATAGGGAGGTTGTGGAGCTAACAATGGTTGTGTTGCCGATAATCGGAGTGTGTGAGCTGGCAAACTGTCCGCAAACGACGAGTTGCGGAATATTGAGAGGGAGCGCAAGACCGGGTGTGGGAGCAGCCATAAACTTCTGCTCGTTTTACATGGTGGGAGCACCGGTGGCGATAGTATTGGCGTTCGTATTGGGAATGGGAATGGTGGGATTGTGTTATGGGCTTCTAGCAGCGCAAATGGCGTGTGTGGTTTCGATTCTTGTTGTGGTTTACAAAACAGATTGCGAGAGTGAGTCTTTGAAAGCCAAAATCTTGGTCGGAAAGAGTCACAGCATGTTATCATCACATGCAGAAGAAGAAGAAGAGGATCAAACACTCAAATGTGAAGAAGGTGTTGTCTTTCTCAACCCCCAATAG 1530 0.4987 MVNREQNPLQNTSSYPTISEVLEEIKRITDIGLPILAMSLVGYLKNMSLVVCMGKLGSLELAAGALAIGFTNITGYSVLSGLAMGMEPLCTQAFGSRNFSLLSITLQRTILMLLLFSLPISLLWLNLEPFMLCLHQNPNITRVASIYCRFAIPDLLANSLLHPLRIYLRSKGTTWPLMWCTLLAILLHLPIIILLTFKLHLGVAGVAISSFLANFNTLFFLLLYMYYTSVSQELSLALPLIKGAHHVGDATLNFIKEWAMLLKFSIQSCLAVCLEWWWYEFMTIMAGYLYNPRASLATAGIVIQTTSLLYTLPTALSASASTRVGNKLGAGQPERASLSTVVAIGLSLASSILGLLWTTIGRERWSRAFTDDREVVELTMVVLPIIGVCELANCPQTTSCGILRGSARPGVGAAINFCSFYMVGAPVAIVLAFVLGMGMVGLCYGLLAAQMACVVSILVVVYKTDCESESLKAKILVGKSHSMLSSHAEEEEEDQTLKCEEGVVFLNPQ* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2348 509 Pfam MatE 34 191 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ahy1g2348 509 Pfam MatE 268 429 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ahy1g2348 509 PANTHER PROTEIN DETOXIFICATION 55 16 482 - -
Ahy1g2348 509 PANTHER MULTIDRUG RESISTANCE PROTEIN 16 482 - -
Ahy1g2348 509 TIGRFAM matE: MATE efflux family protein 34 442 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ahy1g2348 509 CDD MATE_eukaryotic 24 472 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2348 Ahy-Chr1 101506685 101508556 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2348 K03327 - gmx:100798616 700.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2572 11 141758773 141760659 Ahy1g2348 1 101506685 101508556 hybridization
Ahy1g2348 1 101506685 101508556 Ahy14g1032 14 17903211 17905791 PCT
Ahy1g2348 1 101506685 101508556 Ahy4g0940 4 17492214 17494958 PCT
Ahy14g1032 14 17903211 17905791 Ahy1g2348 1 101506685 101508556 PCT
Ahy4g0940 4 17492214 17494958 Ahy1g2348 1 101506685 101508556 PCT