Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0932 ATGACAAAAGATGCCTCGGAACCGGGTGGAAGTGGGGGTGGTGGCTTCCACGCGGTTCATGCGGAGCGTGACCTAGAGTCAAATTGGGAAGTTGACCTCGCCAAGAAACTCGAGGAGTATCTGCTGAAAATTTGCTCCGGGGAGATCACCGGCGAAGAGGAAGGACACATTCCAGTGAATTTTGCAGAAGCTGCTCTACTGCTTCAGGGATCGATACAGGTGTATAGTAGAAAGGTGGAATATCTATACACTCTGGTGTTGCGTGCTTTAGAGTTCCTTTCACAGAAAAGACAGCAAGATCATATAGATGGAGGATCAGACCAACATGATGAGAGTGGTCCCTCTGCTATTACCAATGAAGAAAATGATCAATTCTGGTGCTCGGATGACATCCCAGTTGAAGAGAGGAATTCCTTGGATGACTCTGCAAGCAAAGAAGTGAATTTGGACCACTTCATAAAACCCCCTGCAAATCTAGTTGTTCTTGAAGGTGACTGCTTGGATACTGCTGGTGATGGTGGGGAATTGGAGTCATATCTGTTGTCCACCACAGACTTGTACCAGGATTTTATTCTGTTGGATACATCAGATGCTGTTGCAGTGGATGAGTTTCTAAAGGATAGCAAAGCCAATGCAGCCCAAAATGTTGCTAATAGAGGAGCTTCAACTCGTAAAAGCTTTCTTTCTCCTACAAGGAATTCTGAAGGAGGTGCTAACAAATCTTCAGTGGCAAAAAGTCAGCATGCTAATTCCAACTGTTCCCCTAAAGTTGATTGCCATGACGATGATAATGTTCGGCCCAGTTCTCCCGTCTCTGGTGGTATTGATAATTGTGATTTTGGTTATAACATGGATGATGGATGCAATGCATTTAGGGATTCAGACAATTCAGATGTTGATGATGATGATCCATGGAAACCTTTGAATCCACATGAACCAGGCAACTTGAAAGTGAAGCCGTTTAGAAAAGTTAAAGGATTAAAGAAGAATGGAATTAATGTGAGACGGCGAGTATCAATGAGCATTTTGTTTCCACCTGCAAAATTGCATGGTCCTATTAGTCCAGAGCTCATGGCAATGTGGGAGATGCAGCATCATGCCCACGAACGACAAAAGGATTCTACATCTCTTCCACTATATGAGAAGCTTAGGCAGTCTCTTATCAATGAGGGGAGTAAAACCGATGGAGAATTTTTCAATGCAGAAGCTGATAATGATGACCATGAATTTGATACTGGAAATCCTGATTTTGATATGCCAGAGAATACATACATGGATGAAGATCTACCTCATAACAAAGAGAATGAAGTTAATGATGCTCATGCTGAGGGTGATGAAGATGTAGATAATGATGTTCCAAATTCTCAGGAAAGTTTAGAAGATCTCTGTCGCTCTCACCTGAATGCCCTTCTAGCTAGCATAGCTGAAACTGAGAAGCAAACAGAATTGGCCACTAGGGTTTCAACATGGAAACAAAGAATTGAGCACAGCTTGGAAGAAGAGGATTCCCGGCCACCATTTGATATTCATGAATATGGGGCGAGAATTTTGGACAAACTATCCCTTGAAGAAAGTAGTAGCTGTGTCCTATCCTTTTCTGATTTGGTTGAGGGACAAACAAAGTTCAATATTGCCCGAAGCTTTTCTTCTCTCCTTCAACTGGTGAACAATAGAGACGTGGACCTTCAAAGAAATGTCGACAATGGGAAACCTGTGTGCTACACGGCTGTTAACCCATTCCATGTTAGGCTCCTTAAGCATGACAAAGAACGGGAAGGCATGCAGTTTCGCTTGTCAAAAAAGAGACCAAAGTCTGCAACTAAAAAACCAGCTAAGAACAAAGATGGAAGGGGAAAGTCTCCCACCAATGGTTCATCAAGGGAATACGGACCAATGGGGATGTCACCACCGGCGAATTGCAAGATTTCATCGAAGCTCAGAAAGGAATCATACTCTTGTGAACGGACCTAG 1971 0.4318 MTKDASEPGGSGGGGFHAVHAERDLESNWEVDLAKKLEEYLLKICSGEITGEEEGHIPVNFAEAALLLQGSIQVYSRKVEYLYTLVLRALEFLSQKRQQDHIDGGSDQHDESGPSAITNEENDQFWCSDDIPVEERNSLDDSASKEVNLDHFIKPPANLVVLEGDCLDTAGDGGELESYLLSTTDLYQDFILLDTSDAVAVDEFLKDSKANAAQNVANRGASTRKSFLSPTRNSEGGANKSSVAKSQHANSNCSPKVDCHDDDNVRPSSPVSGGIDNCDFGYNMDDGCNAFRDSDNSDVDDDDPWKPLNPHEPGNLKVKPFRKVKGLKKNGINVRRRVSMSILFPPAKLHGPISPELMAMWEMQHHAHERQKDSTSLPLYEKLRQSLINEGSKTDGEFFNAEADNDDHEFDTGNPDFDMPENTYMDEDLPHNKENEVNDAHAEGDEDVDNDVPNSQESLEDLCRSHLNALLASIAETEKQTELATRVSTWKQRIEHSLEEEDSRPPFDIHEYGARILDKLSLEESSSCVLSFSDLVEGQTKFNIARSFSSLLQLVNNRDVDLQRNVDNGKPVCYTAVNPFHVRLLKHDKEREGMQFRLSKKRPKSATKKPAKNKDGRGKSPTNGSSREYGPMGMSPPANCKISSKLRKESYSCERT* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0932 656 Pfam Condensin II complex subunit CAP-H2 or CNDH2, mid domain 154 303 IPR031719 -
Ahy4g0932 656 MobiDBLite consensus disorder prediction 216 272 - -
Ahy4g0932 656 Pfam Condensin II complex subunit CAP-H2 or CNDH2, C-term 304 595 IPR031737 -
Ahy4g0932 656 MobiDBLite consensus disorder prediction 100 121 - -
Ahy4g0932 656 MobiDBLite consensus disorder prediction 591 656 - -
Ahy4g0932 656 Pfam Condensin II complex subunit CAP-H2 or CNDH2, N-terminal 17 131 IPR009378 -
Ahy4g0932 656 MobiDBLite consensus disorder prediction 216 254 - -
Ahy4g0932 656 PANTHER CONDENSIN-2 COMPLEX SUBUNIT H2 4 616 IPR031739 GO:0030261
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0932 Ahy-Chr4 17371922 17377321 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0932 K11490 - gmx:100786571 888.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1028 14 17828774 17834327 Ahy4g0932 4 17371922 17377321 hybridization