Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy14g1028 ATGACAAAAGATGCCTCGGAACCGGGTGGAAGTGGGGGTGGTGGCTTCCACGCGGTTCACGCGGAGCGTGACCTAGAGTCAAATTGGGAAGTTGACCTCGCCAAGAAACTCGAGGAGTATCTGCTGAAAATTTGCTCCGGGGAGATCACCGGCGAAGAGGAAGGACACATTCCAGTGAATTTTGCAGAAGCTGCTCTACTGCTTCAGGGTTCGATACAGGTGTATAGTAGAAAGGTGGAATATCTATATACTCTGGTGTTGCGTGCTTTAGAGTTCCTTTCACAGAAAAGACAGCAAGATCATATAGATGGAGGATCAGACCAACATGATGAGAGTGGTCCCTCTGCTATTACCAATGAAGAAAATGATCAATTCTGGTGCTCGGATGACATCCCAGTTGAAGAGAGGAATTCCTTGGATGACACTGCAGGCAAAGAAGTGAATTTGGACCACTTCATAAAACCCCCTGCAAATCTAGTTGTTCTTGAAGGTGACTGCTTGGATACTGCTGGTGATGGTGGGGAATTGGAGTCATATCTGTTGTCCACCACAGACTTGTACCAGGATTTTATTCTGTTGGATACATCAGATGCTGTTGCAGTGGATGAGTTTCTAAAGGATAGCGAAGCCAATGCAGCCCAAAATGTTGCTAATAGAGGAGCTTCAACTCGTAAAAGCTTTCTTTCTCCTACAAGGAATTCTGAAGGAGGTGCTAACAAATCTTCAGTGGCAAAAAGTCAGCATGCTAATTCCAACTGTTCCCCTAAAGTTGATTGCCACTTTGACAACGATAATGTTCGGCCCAGTTCTCCCGTCTCTGGTGGTATTGATAATTGTGATTTTGGTTATAACATGGATGATGGATGCAATGCATTTAGGGATTCAGACAATTCAGATGTTGATGATGATGATCCATGGAAACCTTTGAATCCACATGAACCAGGCAACTTGAAGGTGAAGCCGTTTAGAAAAGTTAAAGGATTAAAGAAGAATGGAATTAATGTGAGACGACGAGTATCAATGAGCATTTTATTTCCACCTGCAAAATTACATGGTCCTATTAGTCCAGAGCTCATGGCAATGTGGGAGATGCAGCATCATGCCCACGAACAACAAAAAGATTCTACATCTCTTCCACTATATGAGAAGCTTAGGCAGTCTCTTATCAATGAGGGGAGTAAAACCGATGGAGAATTTTTCAATGCAGAAGCTGATAATGATGACCATGAATTTGATACTGGAAATCCTGATTTTGATATGCCAGAGAATGCATACATGGATGAAGATCTACCTCATAACAAAGAGAATGAAGTTAATGATGCTCATGCTGAGGGTGATGAAGATGTAGATAATGATGTTCCAAATTCTCAGGAAAGTTTAGAAGATCTCTGTCGCTCTCACCTGAATGCCCTTCTAGCTAGCATAGCTGAAACTGAGAAGCAAACAGAATTGGCCACTAGGGTTTCAACATGGAAACAAAGAATTGAGCACAGCTTGGAAGAAGAGGATTCCCGGCCACCATTTGATATTCATGAATATGGGGCGAGAATTTTGGACAAACTATCCCTTGAAGAAAGTAGTAGCTGTGTCCTATCCTTTTCTGATTTGGTTGAGGGACAAACAAAGTTCGATATTGCCCGAAGCTTTTCTTCTCTCCTTCAACTGGTGAACAATAGAGACGTGGACCTTCAAAGAAATGTCGACAATGGGAAACCTGTGTGCTACACGGCTGTTAACCCATTCCATGTTAGGCTCCTTAAGCATGACAAGGAACAGGAAGGCATGCAGTTTCGCTTGTCAAAAAAGAGACCAAAGTCTGCAACTAAAAAACCAGCTAAGAACAAAGATGGAAGGGGAAAGTCTCCCACCAATGGTTCATCAAGGGAATACGGACCAATGGGGATGTCACCACCGGCGAATTGCAAGATTTCCTCAAAGCTCAGAAAGGAATCAAACTCTTGTGAACGGACCTAG 1974 0.4316 MTKDASEPGGSGGGGFHAVHAERDLESNWEVDLAKKLEEYLLKICSGEITGEEEGHIPVNFAEAALLLQGSIQVYSRKVEYLYTLVLRALEFLSQKRQQDHIDGGSDQHDESGPSAITNEENDQFWCSDDIPVEERNSLDDTAGKEVNLDHFIKPPANLVVLEGDCLDTAGDGGELESYLLSTTDLYQDFILLDTSDAVAVDEFLKDSEANAAQNVANRGASTRKSFLSPTRNSEGGANKSSVAKSQHANSNCSPKVDCHFDNDNVRPSSPVSGGIDNCDFGYNMDDGCNAFRDSDNSDVDDDDPWKPLNPHEPGNLKVKPFRKVKGLKKNGINVRRRVSMSILFPPAKLHGPISPELMAMWEMQHHAHEQQKDSTSLPLYEKLRQSLINEGSKTDGEFFNAEADNDDHEFDTGNPDFDMPENAYMDEDLPHNKENEVNDAHAEGDEDVDNDVPNSQESLEDLCRSHLNALLASIAETEKQTELATRVSTWKQRIEHSLEEEDSRPPFDIHEYGARILDKLSLEESSSCVLSFSDLVEGQTKFDIARSFSSLLQLVNNRDVDLQRNVDNGKPVCYTAVNPFHVRLLKHDKEQEGMQFRLSKKRPKSATKKPAKNKDGRGKSPTNGSSREYGPMGMSPPANCKISSKLRKESNSCERT* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy14g1028 657 Pfam Condensin II complex subunit CAP-H2 or CNDH2, mid domain 154 304 IPR031719 -
Ahy14g1028 657 Gene3D Structural maintenance of chromosome 1. Chain E 509 571 IPR023093 -
Ahy14g1028 657 MobiDBLite consensus disorder prediction 100 121 - -
Ahy14g1028 657 Pfam Condensin II complex subunit CAP-H2 or CNDH2, C-term 305 596 IPR031737 -
Ahy14g1028 657 PANTHER CONDENSIN-2 COMPLEX SUBUNIT H2 4 617 IPR031739 GO:0030261
Ahy14g1028 657 Pfam Condensin II complex subunit CAP-H2 or CNDH2, N-terminal 17 131 IPR009378 -
Ahy14g1028 657 MobiDBLite consensus disorder prediction 216 254 - -
Ahy14g1028 657 MobiDBLite consensus disorder prediction 592 657 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy14g1028 Ahy-Chr14 17828774 17834327 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy14g1028 K11490 - gmx:100786571 897.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1028 14 17828774 17834327 Ahy14g1028 14 17828774 17834327 ECH
Ahy14g1028 14 17828774 17834327 Ahy4g0932 4 17371922 17377321 hybridization