Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g4170 ATGCCCAGTTTTCGAGTGAATATAGAAGATTATGTTACTGGGGGTGTCATGGCTTCTCCATCATGCTTCCCTCTTCGTTGGGAGAGCACAGGAAACCAGTGGTGGTATGCAGCCCCCATTGATTGGGCTGCAGCAAATGGCCTCTATGATCTTGTTGCTGAGCTTCTCCACCTTGACACCAACCTCCTCATCAAGCTCACTTCCCTCCGTAGAATTCGCCGCCTTGAAGCCGTTTGGGATGATGAGGCTAAATTTGAAGATGTTGCAAGTTGCCGCTCCAAGGTTGCAAGGAACCTCATGCTTGAATGTGAGAACGGAAGAAGGGAACACAAGTACAACTCCCTCATCCGTGCTGGCTATGGTGGATGGCTTCTCTACACTGCAGCCTCAGCAGGGGATGTGGAATTTGTGAAGGAATTGTTGAGGAGAGACCCTTTGCTTGTTTTTGGTGAGGGAGAGTATGGTGTCACTGACATACTCTATGCTGCTGCAAGGAGCAAGAATTGTGTGGTGTTCAGGCTCTTGCTTGATTCTGCACTCTCTGGGAGTGAAGAACATCATGGTGATGGTGGTGTTTTCAAGAGAGAGATGGTGAATAGAGCAATTCATGCTGCTGCAAGAGGAGGGAATTGGGAAATGCTGAAGGAGCTTGTGGAAAATGTTTCTGAGATTTTGTGCTACAGAGATTCTCAAGGGTGTACTGTCTTGCATTCAGCAGCTGGCAGAGGCCAAGTTGAGGTAGTGAGAAACTTAATTGAGTCATCTGATATTATCAACTCAACTGATGTACAAGGCAATACAGCATTACATGTGGCTTCTTACAGGGGTTACTTACCTGTGGTAGAGATTCTGGTTCAAGCATCACCCTCATTAGCATCCCTAACCAATCATTATGGAGATACTTTTCTTCACATGGCAGTGGCTGGTTTCAGAAGCCCTGGATTCCGAAGACTAGACAAGCACACTGAGCTCATGAACCAATTGATTAGTGGAAAGATTGTGGACATGCAGGACATCATAAATATCAAGAACAATGATGGAAGAACAGCTCTTCACGTAGCTGTGATTCATAACATCCAATGTGAAATAGTGGAATTACTGATGTCCATTCCATCAATTGATTTGAACGTTCGCGATGCGGATGGCATGACCCCCTTGGATCATTTGAAGCAGAGGTCGAAATCAGCATCATCTGAAATCTTGATCAAGCAGTTGATTTCAGCCGGTGGCATCTCTAATTGTCAGGATTATATAGCAAGAAATACTCTTGTTACTCATCTGAAGAATCATGGCATTGTAACAAGTCCTGGCATTTCATTCAGGGTACCGGATGGTGAGATATTCTTGTACACAGGCATTGAGAAATCCTATGATGACAATTTTGATCAGGCAAGTGTGGAGTCAAATTCATGGTCAAGCAGTGAACCGCATGATTACAAGCTAGCTGATTCTCCACATTGCAGCAAGTCTAGTCCTATCAACGATGCGAAAAGGCGCTTAAAGTTCCTTTTCGGGAGGCCTAGAGGAAGAGAGACTAAAAAGGCAGTATCAGAAATTCAAGATGACGATTCTGTGGCTTCTTCTTGCATCTCAAGTAAAGAGTTGGAAGACATTCCAATTCCATTAAGGCAAAGATACTCAAAACTGTGTTCCCTTCCAAACAACAAGAGAACATTACCTATAATGACCAATCTCCCAAGTCCATCCAGTAGAAGTTATTTTGCTGCAGGCCTAATGCAAGGGGTAATTCAGGTAAAGCCATATGTGCCTATTGCTAATGCTGCTCATTCAACTCATAGTCTTCAAGAACATAAGGGTGTTGATATAGATTGTTGTACACCACAGTTGAACTTCAGGCAAGGTTCCTTCAATAAGAAAATGATGAATAAGTATTTTTCTTTTGGAGCACAAGAGCAGGCTTTTGAGGGTGCAAATAGCTGCACTAGGACAAATCTCAGTTCTTTAGTTACATAA 1974 0.4362 MPSFRVNIEDYVTGGVMASPSCFPLRWESTGNQWWYAAPIDWAAANGLYDLVAELLHLDTNLLIKLTSLRRIRRLEAVWDDEAKFEDVASCRSKVARNLMLECENGRREHKYNSLIRAGYGGWLLYTAASAGDVEFVKELLRRDPLLVFGEGEYGVTDILYAAARSKNCVVFRLLLDSALSGSEEHHGDGGVFKREMVNRAIHAAARGGNWEMLKELVENVSEILCYRDSQGCTVLHSAAGRGQVEVVRNLIESSDIINSTDVQGNTALHVASYRGYLPVVEILVQASPSLASLTNHYGDTFLHMAVAGFRSPGFRRLDKHTELMNQLISGKIVDMQDIINIKNNDGRTALHVAVIHNIQCEIVELLMSIPSIDLNVRDADGMTPLDHLKQRSKSASSEILIKQLISAGGISNCQDYIARNTLVTHLKNHGIVTSPGISFRVPDGEIFLYTGIEKSYDDNFDQASVESNSWSSSEPHDYKLADSPHCSKSSPINDAKRRLKFLFGRPRGRETKKAVSEIQDDDSVASSCISSKELEDIPIPLRQRYSKLCSLPNNKRTLPIMTNLPSPSSRSYFAAGLMQGVIQVKPYVPIANAAHSTHSLQEHKGVDIDCCTPQLNFRQGSFNKKMMNKYFSFGAQEQAFEGANSCTRTNLSSLVT* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g4170 657 Gene3D - 31 430 IPR036770 -
Ahy3g4170 657 ProSiteProfiles Ankyrin repeat profile. 264 296 IPR002110 GO:0005515
Ahy3g4170 657 ProSiteProfiles Ankyrin repeat region circular profile. 231 262 - -
Ahy3g4170 657 SMART ANK_2a 120 149 IPR002110 GO:0005515
Ahy3g4170 657 SMART ANK_2a 381 414 IPR002110 GO:0005515
Ahy3g4170 657 SMART ANK_2a 346 377 IPR002110 GO:0005515
Ahy3g4170 657 SMART ANK_2a 35 64 IPR002110 GO:0005515
Ahy3g4170 657 SMART ANK_2a 264 293 IPR002110 GO:0005515
Ahy3g4170 657 SMART ANK_2a 298 338 IPR002110 GO:0005515
Ahy3g4170 657 SMART ANK_2a 231 260 IPR002110 GO:0005515
Ahy3g4170 657 SMART ANK_2a 197 226 IPR002110 GO:0005515
Ahy3g4170 657 SUPERFAMILY Ankyrin repeat 124 402 IPR036770 -
Ahy3g4170 657 Pfam Ankyrin repeat 346 379 IPR002110 GO:0005515
Ahy3g4170 657 Pfam Ankyrin repeats (3 copies) 200 256 IPR002110 GO:0005515
Ahy3g4170 657 Pfam Ankyrin repeats (many copies) 258 306 IPR002110 GO:0005515
Ahy3g4170 657 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 19 651 - -
Ahy3g4170 657 PANTHER ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED 19 651 - -
Ahy3g4170 657 ProSiteProfiles Ankyrin repeat profile. 231 263 IPR002110 GO:0005515
Ahy3g4170 657 ProSiteProfiles Ankyrin repeat region circular profile. 264 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g4170 Ahy-Chr3 141660479 141663923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g4170 97 387 Miscellaneous Gene Families AT1G07710 29.592 3.90e-21 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g4170 - - gmx:100811195 883.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4452 13 144655516 144658982 Ahy3g4170 3 141660479 141663923 hybridization