Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g4153 ATGGACTACGAGAGGATTCACAAACCTCAGACTGGAATAATTTCCCCAAGTAAACTGAGGATGAAGCTGATAGGTCACAGAAAGAAGGATGGATCCAACAGTAACTCATCCAGAACTTCCCCTTCCAGAATTGATGATGCGGAATTTGTCAACAGCTTACTACCTTCTAACAATGGCAACCCTGACGATGAAGGTCTGCATTTCATTTCTTTCTCTTTCTCTTTCTCGTGTGTGTATATGATGAATGCCAATGACTTCATTAATTCCTTAATTCCAGTTACATCTCCCAGCTTAGAACCAAAGGGAAACGGTGCCACCGGCCTTACCAAGATTCAGCATCTTCAAAAGGCTGATGGTGGAAGTTCAAGCTCTATTCACCCGGTGAGAACAATAGAAGAGGAAAATCTTGATTATGACAGTAATGCTAGCTCATCCAGCTTCGAGTTTGATAAAGGAGAGAGATCGGTGAACAATCCAGCAACAAGATCACTATTGAGGCCTATTCCTTCTAAGTGGAATGATGCTGAGAAATGGATAATGAGGCAAAACACACAAGCTACTGTTTCAAAAAAGAATAATACTCTGCATAATAGTCAACCTAATCGCATGGTGAGGGTTGCTCCGGAATCTGGTGTTTATGATCATAAGTTATCAACAGCCAAGGTGACAGAAACAAAGCGGGTTGACAAATTCTCTTTTGTTCCTTCCGATGGAAGAAATCCGGTACTAGAAGAGTCTTATCCCCAAAGCAAAGATTTAAAGGAAGTAAATGACTTGGACTTATCTTGCTCAACAAGTACACATGATCATTCAGCATTTCCTGGAATTCGATCGGTGGCAATGAGAGATATGGGAACAGAAATGACCCCTGTGCCAAGTCAAGAGCCTTCACGAACTGCTACTCCTGGTGGCTCAGCAACTCCACTACGTAGTCCAGCGTCTTCAATGCCTTCAACTCCAAGGAGAGGTGAGCCTGCTCCAACACCTTTGGACAACACAAATGATGATGATTTGCAGTTTCCAACTGAAAATGGAAGAAAACACTTGTCTGAAGAAGAAATGAAGCTCAAGACAAGGAGAGAGATTGCAGCCCTTGGCATGCAGCTTGGTAAGATAAATATTGCTGCTTGGGCAAGCAACGATGACGAGGAAGAGAAAAAGTCTGCTACGAGGGACGCAAATGTGGAACAACAGGAGAGAATTGAATTTGAAAAGCGTGCTGCCCAGTGGGAGGAAGCTCAAAAGTCTAAACATACTGCAAGATTTAAACGTGAGGAAATCAAAATTCAAGCATGGGAAAGTCAGCAAAAGGCAAAGTTAGAAGCAGAAATGAGAAGAATTGAGGCCAAAGTTGAGCAAATGAAAGCTCAGACACATGCAAAGATGGTGAAAAAGATTGCTCTGGCAAGACAAAGATCAGAAGAGAAACGTGCGGCTGCCGTGGCTAGAAAAAGTCGGGAAGCCGAAAGAACCGCAGCTCAAGCAGAGAACATACGCCAAACAGGGCGAATGCCCCCTTCCAGTTACATCTGTTGTGGTTGGGTCTGA 1548 0.4348 MDYERIHKPQTGIISPSKLRMKLIGHRKKDGSNSNSSRTSPSRIDDAEFVNSLLPSNNGNPDDEGLHFISFSFSFSCVYMMNANDFINSLIPVTSPSLEPKGNGATGLTKIQHLQKADGGSSSSIHPVRTIEEENLDYDSNASSSSFEFDKGERSVNNPATRSLLRPIPSKWNDAEKWIMRQNTQATVSKKNNTLHNSQPNRMVRVAPESGVYDHKLSTAKVTETKRVDKFSFVPSDGRNPVLEESYPQSKDLKEVNDLDLSCSTSTHDHSAFPGIRSVAMRDMGTEMTPVPSQEPSRTATPGGSATPLRSPASSMPSTPRRGEPAPTPLDNTNDDDLQFPTENGRKHLSEEEMKLKTRREIAALGMQLGKINIAAWASNDDEEEKKSATRDANVEQQERIEFEKRAAQWEEAQKSKHTARFKREEIKIQAWESQQKAKLEAEMRRIEAKVEQMKAQTHAKMVKKIALARQRSEEKRAAAVARKSREAERTAAQAENIRQTGRMPPSSYICCGWV* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g4153 515 Coils Coil 437 457 - -
Ahy3g4153 515 PANTHER OS02G0116800 PROTEIN 1 512 - -
Ahy3g4153 515 PANTHER REMORIN FAMILY PROTEIN 1 512 - -
Ahy3g4153 515 Coils Coil 393 413 - -
Ahy3g4153 515 MobiDBLite consensus disorder prediction 340 354 - -
Ahy3g4153 515 MobiDBLite consensus disorder prediction 287 354 - -
Ahy3g4153 515 MobiDBLite consensus disorder prediction 142 161 - -
Ahy3g4153 515 MobiDBLite consensus disorder prediction 482 502 - -
Ahy3g4153 515 MobiDBLite consensus disorder prediction 290 318 - -
Ahy3g4153 515 Pfam Remorin, C-terminal region 403 506 IPR005516 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g4153 Ahy-Chr3 141373426 141376266 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g4153 - - aip:107632035 922.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4428 13 144303313 144305902 Ahy3g4153 3 141373426 141376266 hybridization