Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4428 ATGGACTACGAGAGGATTCACAAACCTCAGACTGGAATAATTTCCCCAAGTAAACTGAGGATGAAGCTTATAGGTCACAGAAAGAAGGATGGATCCAACAGTAACTCATCCAGAACTTCCCCTTCCAGAATTGATGATGCTGAATTTGTCAACAGCTTACTACCTTCTAACAATGGCAACCCTGACGATGAAGTTACATCTCCCAGCTTAGAACCAAAGGGAAACGGTGGCACCGGCCTTACCAAGATTCAGCATCTTCAAAAGGCTGATGGTGGAAGTTCAAGCACTATTCACCCGGTGAGAACAATAGAAGAGGAAAATCTTGATTATGACAGTAATGCTAGCTCATCAAGCTTCGAGTTTGATAAAGGAGAGAGATCGGTGAACAATCCGGCAACAAGATCACTATTGAGGCCTATTCCTTCTAAGTGGAATGATGCTGAGAAATGGATAATGAGGCAAAACACACAAGCTACTATTTCAAAAAAGAATAATACTCTGCATAATAGTCAACCTAATCGCATGGTGAGGGTTGCTCCGGAGTCTGGTGTTTATGATCATAAGTTATCAACAGCCAAGGTGACAGAAACAAAGCGGGTTGACAAATTCTCTTTTGTTCCTTCCGATGGAAGAAATCCAGTACTAGAAGAGTCTTATCCCCAAAGCAAAGATTTAAAGGAAGTAAATGACTTGGACTTATCTTGCTCAACAAGTACACATGATCATACAGAATTTCCTGGAATTCGATCGGTGGCAATGAGAGATATGGGAACAGAAATGACCCCTGTGCCAAGTCAAGAGCCTTCACGAACTGCTACTCCTGGTGGCTCAGCAACTCCACTACGTAGCCCAGCGTCTTCAATGCCTTCAACTCCAAGGAGAGGTGAGCCTGCTTCAACACCTTTGGACAACACAACTGATGATGATTTGCAGTTTCCAACTGAAAATGGAAGAAAACACTTGTCTGAAGAAGAAATGAAACTCAAGACAAGGAGAGAGATTGCAGCCCTTGGCGTGCAGCTTGGTAAGATGAATATTGCTGCTTGGGCAAGCAACGGCGACGAGGAAGAGAAAAAGTCTGCTATGAGGGACGCAAATGTGGAACAACATGAGAGAATTGAATTTGAAAAGCGTGCTGCCCAGTGGGAGGAAGCTCAAAAGTCTAAACATACTGCAAGATTTAAACGTGAGGAAATCAAAATTCAAGCATGGGAAAGTCAGCAAAAGGCAAAGTTAGAAGCAGAAATGAGAAGAATTGAGGCCAAAGTTGAGCAAATGAAAGCTCAGACACATGCAAAGATGGTGAAAAAGATTGCTCTGGCAAGACAAAGATCAGAAGAGAAACGTGCGGCGGCCGCAGCTAGAAAAAGTCGGGAAGCCGAAAGAACCGCAGCTCAAGCAGAGTACATACGCCAAACAGGGCGAATGCCCCCTTCCAGTTACACCTGTTGTGGTTGGGTCTGA 1464 0.4399 MDYERIHKPQTGIISPSKLRMKLIGHRKKDGSNSNSSRTSPSRIDDAEFVNSLLPSNNGNPDDEVTSPSLEPKGNGGTGLTKIQHLQKADGGSSSTIHPVRTIEEENLDYDSNASSSSFEFDKGERSVNNPATRSLLRPIPSKWNDAEKWIMRQNTQATISKKNNTLHNSQPNRMVRVAPESGVYDHKLSTAKVTETKRVDKFSFVPSDGRNPVLEESYPQSKDLKEVNDLDLSCSTSTHDHTEFPGIRSVAMRDMGTEMTPVPSQEPSRTATPGGSATPLRSPASSMPSTPRRGEPASTPLDNTTDDDLQFPTENGRKHLSEEEMKLKTRREIAALGVQLGKMNIAAWASNGDEEEKKSAMRDANVEQHERIEFEKRAAQWEEAQKSKHTARFKREEIKIQAWESQQKAKLEAEMRRIEAKVEQMKAQTHAKMVKKIALARQRSEEKRAAAAARKSREAERTAAQAEYIRQTGRMPPSSYTCCGWV* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4428 487 MobiDBLite consensus disorder prediction 312 326 - -
Ahy13g4428 487 MobiDBLite consensus disorder prediction 34 65 - -
Ahy13g4428 487 MobiDBLite consensus disorder prediction 109 134 - -
Ahy13g4428 487 PANTHER REMORIN FAMILY PROTEIN 1 484 - -
Ahy13g4428 487 PANTHER OS02G0116800 PROTEIN 1 484 - -
Ahy13g4428 487 Coils Coil 409 429 - -
Ahy13g4428 487 MobiDBLite consensus disorder prediction 87 101 - -
Ahy13g4428 487 MobiDBLite consensus disorder prediction 24 134 - -
Ahy13g4428 487 MobiDBLite consensus disorder prediction 440 465 - -
Ahy13g4428 487 MobiDBLite consensus disorder prediction 262 311 - -
Ahy13g4428 487 Pfam Remorin, C-terminal region 375 478 IPR005516 -
Ahy13g4428 487 MobiDBLite consensus disorder prediction 259 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4428 Ahy-Chr13 144303313 144305902 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4428 - - aip:107632035 960.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4428 13 144303313 144305902 Ahy13g4428 13 144303313 144305902 ECH
Ahy13g4428 13 144303313 144305902 Ahy3g4153 3 141373426 141376266 hybridization