Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ahy3g3800 | ATGGACACAATAGCTGTCACCACATCAGTGGATTGCCAGAAACAAGTTCGATCATGGAGTCTGTTACGTTCTCTCATGCACTTAATAATCCCCACATGCACCACTTGCATCATAGAGGATAAAGAAGAAGAAGAAGAAGAAACAGCACAAAAGAAGGAGTGCATCAAAAACCAGAAGCATTATTATTACTATTATTCCTCACCATCCAGCACCATCATCACTGCCACTATATTTGGATATAGCAATAATAAGGGTAAGGTAAGTTTGTGCATCGAGAACAACTCGAATTCAAGAAACCCAATTCTGTTATTAGAACTAGCACTTCCAGCAAGCACGTTAGCGAAGGAGATGAGAAGGGGAAGGCTCAGAATCTTGCTAGAGAGCAAGGTGTCATCGTCGTCATCATCACTATTTTCCACGCCTTTATGGAGAATGTATTGTAATGGAAAGAAGGTAGGGTATGCTGTGAAACGCAAGCCTTCGGAAACCGATCTTCAAGCTCTGCACATGATGGGTTCGGTTGGTGTAGGCACTGGTGTGTTGACAATCAAGGTGTTGATGAATAAAGAAGAAGAAGAAGAAGCCAAAGTGACTTACCTTAAAGGTGAGTTTAGAAGGGTGCGTGGATCAAGGGAGTGCGAATCTTTCCATTTGATTGATCCAGAAGGAGATGTGGATCAGGAGCTTAGTATTTTCTTTTTCAGGTCAAGGTGA | 714 | 0.4216 | MDTIAVTTSVDCQKQVRSWSLLRSLMHLIIPTCTTCIIEDKEEEEEETAQKKECIKNQKHYYYYYSSPSSTIITATIFGYSNNKGKVSLCIENNSNSRNPILLLELALPASTLAKEMRRGRLRILLESKVSSSSSSLFSTPLWRMYCNGKKVGYAVKRKPSETDLQALHMMGSVGVGTGVLTIKVLMNKEEEEEAKVTYLKGEFRRVRGSRECESFHLIDPEGDVDQELSIFFFRSR* | 238 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ahy3g3800 | 237 | TIGRFAM | A_thal_3588: uncharacterized plant-specific domain TIGR01570 | 73 | 236 | IPR006460 | GO:0010274 | |
| Ahy3g3800 | 237 | Coils | Coil | 38 | 58 | - | - | |
| Ahy3g3800 | 237 | PANTHER | DUF617 FAMILY PROTEIN | 7 | 236 | - | - | |
| Ahy3g3800 | 237 | Pfam | Protein of unknown function, DUF617 | 73 | 235 | IPR006460 | GO:0010274 | |
| Ahy3g3800 | 237 | PANTHER | - | 7 | 236 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ahy3g3800 | Ahy-Chr3 | 137422803 | 137423516 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ahy3g3800 | - | - | gmx:100794628 | 235.728 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Ahy13g4078 | 13 | 140275144 | 140275872 | Ahy3g3800 | 3 | 137422803 | 137423516 | hybridization | |
| Ahy3g3800 | 3 | 137422803 | 137423516 | Ahy20g1911 | 20 | 106642056 | 106643326 | PCT | |
| Ahy3g3800 | 3 | 137422803 | 137423516 | Ahy10g1490 | 10 | 85017066 | 85018143 | PCT | |
| Ahy20g1911 | 20 | 106642056 | 106643326 | Ahy3g3800 | 3 | 137422803 | 137423516 | PCT | |
| Ahy10g1490 | 10 | 85017066 | 85018143 | Ahy3g3800 | 3 | 137422803 | 137423516 | PCT |