Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4078 ATGGACACAATAGCTGTCACCACATCAGTGGATTGCCAGAAACAAGTTCGATCATGGAGTCTGTTACGTTCTCTCATGCACCTAATAATCCCCACATGCACCACTTGCATCATACAAGATAAAGAAGAAGAAGAAGAAGATGAAACAGCACAAAAGAAGGAGTGCATAAAAAACCAGAAGCATTATTATTATTATTCCTCACCATCCAGCACCATCATCACTGCCACTATATTTGGATATAGCAATAATAAGGGTAAGGTTAGCTTGTGCATCGAGAGCAACTCGAATTCAAGAAACCCAATTCTGCTATTAGAACTAGCACTTCCGGCAAGCACGTTAGCGAAGGAGATGAGAAGGGGAAGGCTCAGAATCTTGCTAGAGAGCAAGGTGTCATCGTCATCATCACTATTTTCCACGCCTTTGTGGACAATGTATTGTAATGGAAAGAAGGTGGGGTATGCTGTGAAACGCAAGCCTTCGGAAACCGATCTTCAAGCTCTGCACATGATGGGTTCGGTTGGTGTAGGCACTGGTGTGTTGACAATGAAGGAGTTGATGAATAAAGATGAGAGTGTTAAAGAAGAAGAAGAAGAAGCAGCCAAAGTGACTTACCTTAAAGGTGAGTTTAGAAGGGTGCGTGGATCAAGGGACTGCGAATCTTTCCATTTGATTGATCCAGAAGGAGATGTAGATCAGGAGCTTAGTATTTTCTTTTTCAGGTCAAGGTGA 729 0.4252 MDTIAVTTSVDCQKQVRSWSLLRSLMHLIIPTCTTCIIQDKEEEEEDETAQKKECIKNQKHYYYYSSPSSTIITATIFGYSNNKGKVSLCIESNSNSRNPILLLELALPASTLAKEMRRGRLRILLESKVSSSSSLFSTPLWTMYCNGKKVGYAVKRKPSETDLQALHMMGSVGVGTGVLTMKELMNKDESVKEEEEEAAKVTYLKGEFRRVRGSRDCESFHLIDPEGDVDQELSIFFFRSR* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4078 242 PANTHER DUF617 FAMILY PROTEIN 7 241 - -
Ahy13g4078 242 TIGRFAM A_thal_3588: uncharacterized plant-specific domain TIGR01570 73 241 IPR006460 GO:0010274
Ahy13g4078 242 Coils Coil 38 58 - -
Ahy13g4078 242 Pfam Protein of unknown function, DUF617 73 240 IPR006460 GO:0010274
Ahy13g4078 242 PANTHER - 7 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4078 Ahy-Chr13 140275144 140275872 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g4078 - - gmx:100794628 244.202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4078 13 140275144 140275872 Ahy3g3800 3 137422803 137423516 hybridization
Ahy13g4078 13 140275144 140275872 Ahy20g1911 20 106642056 106643326 PCT
Ahy13g4078 13 140275144 140275872 Ahy10g1490 10 85017066 85018143 PCT
Ahy20g1911 20 106642056 106643326 Ahy13g4078 13 140275144 140275872 PCT
Ahy10g1490 10 85017066 85018143 Ahy13g4078 13 140275144 140275872 PCT