Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3405 ATGGCGAAAGAAAAGAAGCTCCAAGAACACCAACAAGAGAACGAAGCTCCAATCTATGGAGACATCTTAGAGGCTGTATTATCTCACGTGCCACTTGTCCACCTCGTGCCAGCACGCCACGTGTCCAAGGCGTGGGAGCGCGCCGTCTCCACTTCCCTCCAAATCAACCCCATCAAGCCCTGGCTCACCGTGCATGTCCAGAGCCCACGTGCATATCACGTGACAACCTCCCACGCCTACGACCCACGCTCCCGTGCCTGGGTTCGGATCCACGCGCCTCCCATAAATTTGTCATCCGCTATACGCTCTTCCCACTCCACGGTCCTCTACGCCATCTCCCCTGGCAGATTCTCCTTCTCCGTTGACACTCTCCACCATGACTGGCACCACGTGCATCCACCGCGCGTGTGGCGCATCGACCCCGTGGTTGCCAGCGTGGGAAGCAAGATCGTCGTCGCTGGCGGCGTGTGCGACTTCGAGGATGATCCCCTCGCGGTGGAGATGTACGATGCGGATTCCGGTGCGTGGATCCGGTGTCAGTCTATGCCGGCAATCCTGAAGGACTCCTCAGCGTCTACGTGGCTTTCCGTTGCCGTCACAGGAGACATGGTTTTCGTGACGGAGAAAAACTCCGGTGTGACGTACTCGTTTGACTGTGGCGCCGGAATCTGGCACGGACCGTACCACCTTCGCCCCGACGACGGAGTTTTCTGCTGCGTGATTGGAACGTTGAGGAACTGTTTGATCGTGGCGGGAACAATCGGCGACGCGGAGAACGTGAAGGGAGTGAAACTGTGGAAAGTGAATGGGGAGTTAGGGTTTGGATCGGGGGAGCATTGGTGCGAGGAGCTGGCGGCTATGCCGGAGGAGATGGTGGAGAAGCTTAAGGGGGAGGACGGTTGCGGTGCGGTGGCGTCGGTCACTGTAACGACGGTGGGGGATTTCGTTTACGTAGGGAACCCGTCGGAGCCGGAGGAGATGGTGGTTTGTGAGGTCAGGGAAAACGGCGGGTGTGAATGGTGGAGCCTGAGAAACGCGGTGGTGGAGGAGGGAGGTCGGATGCAGAGAGTAGTGGTTTGCGGCAGCAATGTTGGGCTTGAAGATCTGCAGAGAGCGGTTTCGGAGAATTGCGGGTTTGTTGTGAAAGAGACGAGGGAGTGGATTGAAACTTAA 1173 0.5797 MAKEKKLQEHQQENEAPIYGDILEAVLSHVPLVHLVPARHVSKAWERAVSTSLQINPIKPWLTVHVQSPRAYHVTTSHAYDPRSRAWVRIHAPPINLSSAIRSSHSTVLYAISPGRFSFSVDTLHHDWHHVHPPRVWRIDPVVASVGSKIVVAGGVCDFEDDPLAVEMYDADSGAWIRCQSMPAILKDSSASTWLSVAVTGDMVFVTEKNSGVTYSFDCGAGIWHGPYHLRPDDGVFCCVIGTLRNCLIVAGTIGDAENVKGVKLWKVNGELGFGSGEHWCEELAAMPEEMVEKLKGEDGCGAVASVTVTTVGDFVYVGNPSEPEEMVVCEVRENGGCEWWSLRNAVVEEGGRMQRVVVCGSNVGLEDLQRAVSENCGFVVKETREWIET* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3405 390 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 5 373 - -
Ahy3g3405 390 SUPERFAMILY Kelch motif 60 263 IPR015915 GO:0005515
Ahy3g3405 390 Gene3D - 59 319 IPR015915 GO:0005515
Ahy3g3405 390 PANTHER KELCH REPEAT-CONTAINING F-BOX-LIKE PROTEIN 5 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3405 Ahy-Chr3 132840607 132842211 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3405 - - adu:107481346 796.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g1400 15 24360582 24362231 Ahy3g3405 3 132840607 132842211 hybridization
Ahy5g1231 5 33267631 33269260 Ahy3g3405 3 132840607 132842211 PCT
Ahy3g3405 3 132840607 132842211 Ahy5g1231 5 33267631 33269260 PCT