Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g1400 ATGGCTGCAACAGCAGAAGCACCTATTTATGGGGATATCTTAGAGGCAATATTCTCGCACGTGCCACTAATCCATCTCGTACCGGCTTATCACGTGTCAAGGGCATGGAACCACGCTGTATCCTCCTCCCTGGCACACGTTAACCCCATCAAGCCATGGCTCACGATCCTCACACAGAGTAAACGTGATCCTCACGTGACAGCCACTTACGCCTACGACCCCCGCTCGCGCGTCTGGATTGAAATGAATCTTCAACCGTCGATCGAGCACGCCTCCGCCGTCCAATCATCCCAATCAACTCTGCTCTACACGCTAACCCCCGCGGGCTTCGCCTTCACGGATAGTGAAGGTGCGTTCCGCGTCTCGTGGCACAACGCGCCAGCACCGAGCGTGTGGCGCACCGACCCAGTCGTAGCGCGCGTGGGTAATCGCGTTGTGGTAGCTGGAGGCGCGTGCGATTTTGAGGACGACCTACACGCGGTGGAAGTCTACGACATGGAGGCACGCGCTTGGAACACGAGCCAGTCCATGCCTGAGCTGCTGAAGGGATCTGCAGGGTCCACGTGGCTCTCAGTCGCCGTTGTCGGTGACAAGATGCTGGTGACGGAGAAAAAATCCGGCGTGACTTTTTCGTTTGATCCATTTTCTGACACGTGGCACGGACCGTACGATCTTCGCCCGGATCAGAATGTGTTCTATTGCCTCACCGGAATCCTAGCGGGGAAATTGACGGTGGCCGGGGTGATGAGTGGCGCGGAAAACTCGAAGAGAGTGAAATTGTGGTCCGTGGAAGGGGAACTAGCTTCGGGTTCGGGATTTTGGTTCGAGGAAGTGGGAGAGATGCCGAATGAGATGGCGGAGAAGGTCATGAGAGGTTGGGATTTTGGTTCGGTGGTAGTGACTTGGGTTGGGAATTTTGCTTACGTTATGAACCCGGTTAAACCGGAGGAGGTGGTGGTTTGTGAGGTCGGGGCCAGGTGCGAGTGGTGGAGCGTGAGAAACGTTGCTGCGGGGGATTTGACGAAGAGAATGGTGGTTAGTGGCGGTGGCGTAAGCTTACAGGAGGTGCAGCGGGCGGTGGTTACGGAGAATCCAAGATTCTGCATGAAGCTAGTGTGA 1119 0.5612 MAATAEAPIYGDILEAIFSHVPLIHLVPAYHVSRAWNHAVSSSLAHVNPIKPWLTILTQSKRDPHVTATYAYDPRSRVWIEMNLQPSIEHASAVQSSQSTLLYTLTPAGFAFTDSEGAFRVSWHNAPAPSVWRTDPVVARVGNRVVVAGGACDFEDDLHAVEVYDMEARAWNTSQSMPELLKGSAGSTWLSVAVVGDKMLVTEKKSGVTFSFDPFSDTWHGPYDLRPDQNVFYCLTGILAGKLTVAGVMSGAENSKRVKLWSVEGELASGSGFWFEEVGEMPNEMAEKVMRGWDFGSVVVTWVGNFAYVMNPVKPEEVVVCEVGARCEWWSVRNVAAGDLTKRMVVSGGGVSLQEVQRAVVTENPRFCMKLV* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g1400 372 PANTHER KELCH REPEAT-CONTAINING F-BOX-LIKE PROTEIN 4 360 - -
Ahy15g1400 372 Gene3D - 55 272 IPR015915 GO:0005515
Ahy15g1400 372 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 4 360 - -
Ahy15g1400 372 SUPERFAMILY F-box domain 12 43 IPR036047 GO:0005515
Ahy15g1400 372 SUPERFAMILY Kelch motif 52 284 IPR015915 GO:0005515
Ahy15g1400 372 Pfam Kelch motif 133 178 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g1400 Ahy-Chr15 24360582 24362231 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g1400 - - gmx:100805691 420.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g1400 15 24360582 24362231 Ahy15g1400 15 24360582 24362231 ECH
Ahy15g1400 15 24360582 24362231 Ahy3g3405 3 132840607 132842211 hybridization
Ahy5g1231 5 33267631 33269260 Ahy15g1400 15 24360582 24362231 PCT
Ahy15g1400 15 24360582 24362231 Ahy5g1231 5 33267631 33269260 PCT