Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3402 ATGCCTTGGATTAATGACTCATTGGGACAGAAGAAAAGGGCATGCATGTTGTTCTTCTTCTCCATCTCCATGAACAACACCAAGAGGATTTCTTCATTCTCTGAGTCTTTTCTTTCACACAGGAGAAAAGTGTTTGCTGGTTTTGGTTTAGTTGTTGCATCTTCTCTTTTCATAATCTCATTGTTCTTCTTCCTCGGTACTAATAACTCGGTTCCCAAGGTTGAACATGTCTTTGTTCCACCGTTTTATGACACTTATTATTCTTCACCTTGTAACAATCACTTCCACCCTTCTAATAATGTTTCTCATCATGAAACTTCAACTTTAGCAAGTGTTTCTGTTCATGTGAAGAACAATAGCACTATTTTGGTGAATTCTACTACTAATGAGAATAATAGAAACAACAATGCAACCTTGCATGCACATGATGAGGAAAGAGTAATTTCAAGGAAAACTGCAGGTGGTGGGAATTCATCTAGGATCTCCAAAGATTCAAACTTTCATGATGGAGGAATAAGGGTTGTTACAAATTATTCAAGTGTTTCTGGGGAAGGGAATAACAATGGGACACAAATGAAAAGTTCTTCAAGTTTAATTATAAGCAGTCCTAATAATGTGGGGTATGAGCAAAGCAAGAAGAATGTAACTGGCATTATTCATGATGGTTTGTATGAGAATTGTAACATATTTGATGGGAAGTGGGTAAGGGATGATTCAAAGCCTTACTATCCATTAGGTTCTTGTCCCTTCATTGACAGAGATTTTGACTGTCACAGTAATAAGAGGCCTGATTCTGAGTATGTCAAGTGGAAGTGGAAGCCAAATGGGTGTCACATTCCAAGTTTGAATGCAAGTGATTTTCTGGAGAGGCTTAGAGGACAGAGGTTGGTTTTTGTGGGAGATTCCCTTAACAGGAACATGTGGGAGTCCCTTGTATGCATCCTTCGCCAAAGCATAAAAAACAAGGCACGTGTTTTTGAGATCTCGGGAAAAAGGGAATTTAAGAAGAAAGGTGTCTATGCTTTTAGATTTGAGGATTATAATTGCTCGGTGGATTTTGTTATGTCACCATTCATTGTTCAAGAGTCAACTCTCAAAGGCAAGAATGGGACATTTGAGACACTGAGGCTGGATTTGATGGACCAAACAACTAAAAAGTATGAGGATGCTGATATCATAGTCTTCAACACAGGACATTGGTGGACCCATGAGAAAACATCTAAAGGAGAAGATTACTATCAAGAAGGGAACCATGTATACCCAAGACTTAAGGCTTTGGATGCATACAAGAGGGCTTTGACCACTTGGGCTACATGGGTTGACCGACACATTGATCCTAATCAAACCCGGGTTTTCTTCAGGGGATACTCAACTACACATTTCTGGGGAGGGCAATGGAACTCAGGAGGACAGTGCCACAAAGAAACTGAGCCAATATTCAATGAAACTTACTTGCAAAAGTATCCTTCAAAGATGAGGGTTGTGGAGTATGTTATCCATAACATGAAGACACCAGTTGTGTACATGAACATTAGCAGGCTCACTGATTACAGAAAAGATGGGCATCCTTCCATATATAGAAAGGATTATAAACCATCAACAACAGATCAGAACAACTCTCTATTTGAAGATTGCAGCCATTGGTGTTTACCAGGAGTGCCAGATACTTGGAATGAATTACTATATGTTTCTCTCTTAAAAGATGGAAGGGGAACTTGGAAAACTTGA 1728 0.3918 MPWINDSLGQKKRACMLFFFSISMNNTKRISSFSESFLSHRRKVFAGFGLVVASSLFIISLFFFLGTNNSVPKVEHVFVPPFYDTYYSSPCNNHFHPSNNVSHHETSTLASVSVHVKNNSTILVNSTTNENNRNNNATLHAHDEERVISRKTAGGGNSSRISKDSNFHDGGIRVVTNYSSVSGEGNNNGTQMKSSSSLIISSPNNVGYEQSKKNVTGIIHDGLYENCNIFDGKWVRDDSKPYYPLGSCPFIDRDFDCHSNKRPDSEYVKWKWKPNGCHIPSLNASDFLERLRGQRLVFVGDSLNRNMWESLVCILRQSIKNKARVFEISGKREFKKKGVYAFRFEDYNCSVDFVMSPFIVQESTLKGKNGTFETLRLDLMDQTTKKYEDADIIVFNTGHWWTHEKTSKGEDYYQEGNHVYPRLKALDAYKRALTTWATWVDRHIDPNQTRVFFRGYSTTHFWGGQWNSGGQCHKETEPIFNETYLQKYPSKMRVVEYVIHNMKTPVVYMNISRLTDYRKDGHPSIYRKDYKPSTTDQNNSLFEDCSHWCLPGVPDTWNELLYVSLLKDGRGTWKT* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3402 575 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 279 562 IPR026057 GO:0016740
Ahy3g3402 575 Pfam PMR5 N terminal Domain 226 278 IPR025846 -
Ahy3g3402 575 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 2 37 572 IPR029967 -
Ahy3g3402 575 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 37 572 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3402 Ahy-Chr3 132802575 132805567 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3402 - - ccaj:109816771 677.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g1389 15 24086716 24090926 Ahy3g3402 3 132802575 132805567 hybridization
Ahy5g1240 5 33561039 33565239 Ahy3g3402 3 132802575 132805567 PCT
Ahy3g3402 3 132802575 132805567 Ahy5g1240 5 33561039 33565239 PCT