Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g1389 ATGGACAAGAACTGCAGCAGCAACAGCTTCAACAGCATGAAGAGGCTTGCGTTCTCCGAACCCTTCATGTCACAGAGGAGAAAAGTAGTTTCTGGTTTCAGTTTAGGCCTTGGAGCTTCTCTCCTTTTTCTCACTCTTCTATTCCTCAACACTTCCCTTATACCTCCCAAAGTTCAAGTCTTTCTTCAAGGATCTGGTTCCGCCATTTCCAATTCTTCTTCTTCTTCCTTCTATTCTTGGTCATTTTCCATCAGAACCAAACATCCCTTCTCTTCTTCTTCTGCGGCGAATAATAATGATGCTTCTCTCACTGTGAGTTCCCCGCAGAGGGATGAAGAACGAATTGAAGAAAGTCGCGGAGTGAATGCTTCAAGTCAGGGTTTGAACAAGAACACACGGTTTGCGAATTTCACCGTCGGTGGTGAGAATGCAACGCTTAATAGTAGTGAAGTGCAACAGTTTCCGCTGAAATCCAACGCTGAGAACGTTACATTGGTCACTGAGATTGGGAACTTCACTGATAATAGGGTTGTCAAAGATGTGGACTTTGCTGCGAATGCAACTGTTTCTTCTTCTGGTGAATCAAACGTGACTTCTGTTAATAATAATAATAATAACAATAATAATAATGATAATGTAACTGTGGTTATTGATGATGGTGGTTCTTCTTCACAAGATGTGAAGATGGAGGGTCGTTTTAGTTTAAATGATGAGAATTGTGATATCTATGATGGTATGTGGGTAAGGGATGATTCAAAGCCATATTACCCCTTAGGTTCATGTCCACTCATCGATAGGGATTTTGATTGCCACCTTAATGGAAGGCCTGATAGTGATTATGTGAAATGGAAATGGCAGCCACATAAATGCGACATTCCAAGTTTGAAAGCAACTGATTTTCTGGAGAGACTGCGAGGTCAGAGGCTAGTTTTTGTGGGGGATTCACTGAACAGGAACATGTGGGAGTCGATGGTGTGTATACTACGTCAAAGTGTCAAGGACAAGAAACGTGTTTTTGAAATTTCTGGAAGACATGAATTTAAGAAGAAAGGTGTTTATGCTTTTAGATTTGAGGATTATAATTGCTCAGTAGATTTTGTTAGTTCACCATTCATTGTTCGAGAGTCAACTTTCAAAGGCATAAATGGATCATTTGAGACATTAAGATTGGATTTGATGGACCAGACAACTACTGTATATCATGATGCTGATATCATTGTCTTCAATACTGGCCACTGGTGGACGCATGAAAAAACATCTAAGGGAGAAGACTACTATCAAGAAGGCAACCATGTATACCCAAGACTCAAGGTTTTGGATGCATTTAGAAGGGCTTTGACGACTTGGGCTAGATGGGTCGACAAAAATATTGATGCCAACCGAACTCAGGTTGTCTTCAGAGGATACTCAAATACCCATTTCAGAGGTGGGCAATGGAACTCCGGAGGGCAGTGCCATAAAGAAACGGAGCCGATATATAACACAACTCACTTAAAGAAATACCCTTCAAAAATGAGGGCTTTAGACAATGTCATCTCAAAAATGAAAACACCAGTGATGTATATGAACATATCAAGGCTAACAGATTACAGAAAAGATGGCCATCCTTCTATATACAGAATGGAGTACAAGACCGAAGCCGAAAGGGCTGCCGCCGAGCTACACCAAGATTGCAGCCATTGGTGCCTGCCTGGAGTACCGGATACTTGGAACGAATTACTCTATGCTTCTCTCTTGAAATCTGGAAGAGGCAGTTGGAAAAGCTGA 1767 0.4143 MDKNCSSNSFNSMKRLAFSEPFMSQRRKVVSGFSLGLGASLLFLTLLFLNTSLIPPKVQVFLQGSGSAISNSSSSSFYSWSFSIRTKHPFSSSSAANNNDASLTVSSPQRDEERIEESRGVNASSQGLNKNTRFANFTVGGENATLNSSEVQQFPLKSNAENVTLVTEIGNFTDNRVVKDVDFAANATVSSSGESNVTSVNNNNNNNNNNDNVTVVIDDGGSSSQDVKMEGRFSLNDENCDIYDGMWVRDDSKPYYPLGSCPLIDRDFDCHLNGRPDSDYVKWKWQPHKCDIPSLKATDFLERLRGQRLVFVGDSLNRNMWESMVCILRQSVKDKKRVFEISGRHEFKKKGVYAFRFEDYNCSVDFVSSPFIVRESTFKGINGSFETLRLDLMDQTTTVYHDADIIVFNTGHWWTHEKTSKGEDYYQEGNHVYPRLKVLDAFRRALTTWARWVDKNIDANRTQVVFRGYSNTHFRGGQWNSGGQCHKETEPIYNTTHLKKYPSKMRALDNVISKMKTPVMYMNISRLTDYRKDGHPSIYRMEYKTEAERAAAELHQDCSHWCLPGVPDTWNELLYASLLKSGRGSWKS* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g1389 588 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 292 576 IPR026057 GO:0016740
Ahy15g1389 588 Pfam PMR5 N terminal Domain 239 291 IPR025846 -
Ahy15g1389 588 MobiDBLite consensus disorder prediction 192 211 - -
Ahy15g1389 588 MobiDBLite consensus disorder prediction 90 127 - -
Ahy15g1389 588 MobiDBLite consensus disorder prediction 90 106 - -
Ahy15g1389 588 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 20 586 - -
Ahy15g1389 588 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 20 586 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g1389 Ahy-Chr15 24086716 24090926 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g1389 - - adu:107488803 1106.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g1389 15 24086716 24090926 Ahy3g3402 3 132802575 132805567 hybridization
Ahy5g1240 5 33561039 33565239 Ahy15g1389 15 24086716 24090926 PCT
Ahy15g1389 15 24086716 24090926 Ahy5g1240 5 33561039 33565239 PCT