Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3384 ATGGAGGGACAAGATCATAACAACAACTACACTCGCCCTCTTCTCACACCGCCGCCGCTACAGGATCACCACTTGGCCGCCGTATTCACCACAGAATCCCATGACATCCCTCCGATCAGCAGCCTCAGAGTCTTCGGCAGGGAGTTTCTCCTCGAGTCCAAGAAGCTCTGGTACCTGGCCGGCCCTGCCATCTTCACCTCTGTCTGCCAGTACTCACTCGGCGCCATCACTCAGCTCTTCGCTGGCCACGTTGGCACCTTAGAGCTCGCTGCTGTCTCTGTCGAGAACTCCGTTATCGCCGGCTTCTGCTTCGGCATCATGCTTGGGATGGGAAGTGCGTTGGAAACGCTATGTGGGCAAGCCTTCGGAGCGGGACAATTGAGGATGTTAGGGATTTACATGCAGCGATCATGGGTCATTCTCAACACCACCTGCTTGCTCCTCAGCCTTCTCTACGTCTTCGCCAAGCCGCTCCTCAATTTTATTGGCCAGACGGCCGCCATATCCAAGGCGGCGGGAGAGTTCGCCGTCTGGATGATACCGCAGCTCTTCGCATACGCCATGAATTTCCCGATCCAGAAGTTCCTGCAGGCGCAAAGCAAGATCATGGTCATGGCGTGGATAGCAGCCGCGGCGCTTGTGATGCACCTGCTGCTCAGCTGGCTGCTTATGCTGAGGCTGGGCTGGGGGCTGGTCGGGGCGGCGGTGGTGCTGAACGGGTCATGGTGGTTCATAGTGGTGGCGCAACTTGTGTACATCCTGAGCGGCACGTGCGGGACCGCGTGGAGTGGCTTCTCGATAAAGGCGTTTGAGAATCTCTGGGGATTCGTTCGTCTCTCCCTTGCATCTGCAGTTATGCTCTGCCTGGAAATGTGGTATTTTATGGCACTAATTCTGTTCGCGGGATATCTCAAGAATGCAGAAGTTTCAGTTGATGCCTTATCTATCTGCATGAACATCTTGGGTTGGACCGTGATGGTATCCTTTGGAATGAATGCAGCAGTAAGTGTGAGGGTGTCAAATGAACTAGGGGCATCACACCCAAGAGCAGCGAAATTCTCGCTAGTGGTAGCAGTGATAACATCGTTTGTGCTGGGTCTAGCAATGTCACTGGTTCTTATCATGTTCAGGAAGCAATACCCTTCCTTGTTCTCGAATGATTCAGCGGTGAAGGAACTGGTGATGGAGCTGACACCAATGTTGGCCTTTTGCATCATCATCAACAATGTGCAGCCTGTTCTTTCAGGTGTTGCCGTTGGGGCAGGGTGGCAGAGTCTTGTTGCCTATGTCAACATTGCTTGTTACTATCTTTTTGGAGTTCCTCTTGGACTTATTTTGGGATATGCGCTTGACTTTGGTGTCATTGGGATCTGGTCTGGGATGCTCACGGGGACCATTGTCCAAACTTGTGTTCTATTCATCATAGTATATAGAACTGACTGGGACAAAGAGGCCTCCCTTGCAGAAGATAGAATAAAGAAGTGGGGTGGGCATAAAGATTCAAAACCCAATGGTGTCGCAAATAATGATCAGCAAACATGA 1542 0.5195 MEGQDHNNNYTRPLLTPPPLQDHHLAAVFTTESHDIPPISSLRVFGREFLLESKKLWYLAGPAIFTSVCQYSLGAITQLFAGHVGTLELAAVSVENSVIAGFCFGIMLGMGSALETLCGQAFGAGQLRMLGIYMQRSWVILNTTCLLLSLLYVFAKPLLNFIGQTAAISKAAGEFAVWMIPQLFAYAMNFPIQKFLQAQSKIMVMAWIAAAALVMHLLLSWLLMLRLGWGLVGAAVVLNGSWWFIVVAQLVYILSGTCGTAWSGFSIKAFENLWGFVRLSLASAVMLCLEMWYFMALILFAGYLKNAEVSVDALSICMNILGWTVMVSFGMNAAVSVRVSNELGASHPRAAKFSLVVAVITSFVLGLAMSLVLIMFRKQYPSLFSNDSAVKELVMELTPMLAFCIIINNVQPVLSGVAVGAGWQSLVAYVNIACYYLFGVPLGLILGYALDFGVIGIWSGMLTGTIVQTCVLFIIVYRTDWDKEASLAEDRIKKWGGHKDSKPNGVANNDQQT* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3384 513 PANTHER PROTEIN DETOXIFICATION 31 22 495 - -
Ahy3g3384 513 PANTHER MULTIDRUG RESISTANCE PROTEIN 22 495 - -
Ahy3g3384 513 TIGRFAM matE: MATE efflux family protein 62 458 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ahy3g3384 513 CDD MATE_eukaryotic 52 486 IPR045069 GO:0042910|GO:1990961
Ahy3g3384 513 Pfam MatE 62 222 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ahy3g3384 513 Pfam MatE 283 444 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3384 Ahy-Chr3 132530624 132539099 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3384 K03327 - gmx:100783627 786.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g1353 15 22547870 22552426 Ahy3g3384 3 132530624 132539099 hybridization
Ahy3g3384 3 132530624 132539099 Ahy15g1353 15 22547870 22552426 PCT