Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g1353 ATGGGAAGTGCGTTGGAGACATTGTGTGGGCAAGCCGTTGGAGCGGGTAAACTAGACATGTTGGGTGTGTACATGCAAAGATCATGGGTCATCCTCAACACAACTGCCCTCCTCCTTTGCCTTTTATACATTTTTGCGCGCCAACTCCTAAAAGCCATCGGAGAAACAACCGCAATTGCCGAGGCGGCCGGCGTTTTCGCCGTCTGGATGATCCCGCAGCTGTTCGCCTACTCCATGAATTTTCCAATTCAGAAGTTCTTGCAAGCACAAAGCAAGATTATGGTCATGGCTTGGATTTCCGCCGCGGCGCTCGTAGCGCACGCGGGGCTAAGCTGGGTCTTGATGCTTAAAGTGGGGTGGGGCCTTGTTGGTGCGGCGGTGGTTTTGAATGTGACGTGGTGGTTCATAGTTGTGGATCAGTTGGCATATATATTTGGTGGTAGTTGCGGTGAAGCGTGGAGTGGCTTCTCCTTGCAAGCATTTCATAATCTTTGGGGTTTTCTTCGTCTCTCATTTGCCTCTGCTGTCATGCTTTGCCTGGAAGTTTGGTACTTTATGGCCCTAATTCTGATGGCTGGTTATCTCAAGAACCCAGAAGTTGCGGTGGATGCAATGTCCATTTGCATGAACATATTGGGATTGACAGTGATGTTAGCATTCGGAATGAATGCAGCAGTAAGTGTGAGAGTGTCAAATGAATTGGGGGCAGGTCATCCAAGAACAGCGAAATTCGCTGTAGCTGTGGCTGTGATTAGTTCATTTGCGATTGCTTTAGTGCTCTCCATGATTCTCGTCATATTCAGGAAGCAATACCCTTCACTGTTTTCAACGGACGAAGATGTGAAAGAGCTTGTGATAGAGCTGACACCCATGTTGGCGTTGTGCATTATAATCAACAACGTGCAACCAGTTCTTTCAGGTGTGGCTGTTGGGGCAGGCTGGCAAGCTATCGTTGCTTGTGTCAACATTGCTTGCTACTACATTTTTGGTATTCCTCTTGGACTTCTTTTGGGCTTCATGCTTGACTTGGGTGTCCTTGGAATTTGGTCTGGAATGTTGTCTGGGATAGTCCTACAAACTTGTGTGCTATTCTTCATGATCTACAAAACGAATTGGAATAAAGAGGCTTCTCTTGCTGAAAATAGGATAAAGAAGTGGGGAGGTTATAAAGATACAAAAGTGAATCAGATTGTGGAGGATATTCAAGAAGCATGA 1215 0.4658 MGSALETLCGQAVGAGKLDMLGVYMQRSWVILNTTALLLCLLYIFARQLLKAIGETTAIAEAAGVFAVWMIPQLFAYSMNFPIQKFLQAQSKIMVMAWISAAALVAHAGLSWVLMLKVGWGLVGAAVVLNVTWWFIVVDQLAYIFGGSCGEAWSGFSLQAFHNLWGFLRLSFASAVMLCLEVWYFMALILMAGYLKNPEVAVDAMSICMNILGLTVMLAFGMNAAVSVRVSNELGAGHPRTAKFAVAVAVISSFAIALVLSMILVIFRKQYPSLFSTDEDVKELVIELTPMLALCIIINNVQPVLSGVAVGAGWQAIVACVNIACYYIFGIPLGLLLGFMLDLGVLGIWSGMLSGIVLQTCVLFFMIYKTNWNKEASLAENRIKKWGGYKDTKVNQIVEDIQEA* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g1353 404 Pfam MatE 174 335 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ahy15g1353 404 Pfam MatE 1 113 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ahy15g1353 404 TIGRFAM matE: MATE efflux family protein 1 349 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ahy15g1353 404 CDD MATE_eukaryotic 1 377 IPR045069 GO:0042910|GO:1990961
Ahy15g1353 404 PANTHER MULTIDRUG RESISTANCE PROTEIN 1 386 - -
Ahy15g1353 404 PANTHER PROTEIN DETOXIFICATION 31 1 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g1353 Ahy-Chr15 22547870 22552426 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g1353 K03327 - gmx:100783627 592.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g1353 15 22547870 22552426 Ahy15g1353 15 22547870 22552426 ECH
Ahy15g1353 15 22547870 22552426 Ahy3g3384 3 132530624 132539099 hybridization
Ahy15g1353 15 22547870 22552426 Ahy15g1353 15 22547870 22552426 PCT
Ahy3g3384 3 132530624 132539099 Ahy15g1353 15 22547870 22552426 PCT