Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2854 ATGGAGAAGAAGCAGAGTAGTGCAGCGGCCATGGGGGTTGATGACTCCTTGAACCCACGAGTCGACGCCGTGAAGCCTTCAAGGACTGTGGCCATAAGCGACCAAGCAAACGCACTGGTTCAAGCTGGCGTCCCCGTTATTCGCCTGGCCGCCGGGGAGCCCGATTTCGACACTCCCGCTCCCATTGCTGAGGCTGGGATTAATGCAATTCGTGAAGGCCATACAAGGTACACCCCGAATGCCGGAACATTACAATTACGCCAGGCTATTTCTCATAAGCTCAAAGAGGAGAACGGGATCACTTACGCCCCTGATCATATTGTGCTTAGTAATGGAGCCAAGCAGAGTCTTGCCCAGGCCGTTCTTGCAGTTTGCTCCCCGGGAGACGAGGTCATTATTCCTGCTCCATATTGGGTGAGTTACCCAGAAATGGCAAGATTGGCTGATGCTGTACCTGTTATTCTTCCAACATCAATAGATAATCATTTCCTTTTGGACCCCAAACTCCTTCAATCCAAAATTACTCAAAGATCAAGGCTTCTCATTCTTTGCTCGCCATCTAACCCAACAGGATCTGTCTACCCCAAGAAATTACTTCAAGACATAGCCATTGTAGCAAACCACCCCAGGCTTCTGATTCTCTCTGATGAGATTTACGAGCATATAATTTATGCACCAGCAACTCATACAAGCTTTGCATCACTACCAGGAATGTGGGACAGAACCTTAACTGTGAACGGATTTTCCAAGGCCTTTGCAATGACTGGATGGCGGCTTGGATATATTGCTGGTCCAAAACATTTTGTTGCAGCATGTGGAAAGATTCAAAGTCAGTTCACTACAGGGCCCAATAGCATAGCTCAGAAAGCTGGAGTTGCAGCGTTAGGACTAGGCTATGCTGGTGGGGAAATTGTAGCTAATATGGTGAAAGCATTTCGGGAGCGCCGAGATTTCTTGGTTAAAAGTTTTAGGGAAATGGAGGGTCTTAAAATATCAGAACCCCAGGGGGCATTTTATCTATTCATTGATTTAAGCTACTACTATGGAAGAGAAGCTGAAGGATTTGGTAGAATTGATGATTCGGAGTCCCTTTGTCGATATCTTTTGGATAAGGGCCAGGTGGCCTTGGTGCCTGGGAGTGCATTTGGAGATGATACTTGTGTTCGGATATCATATGCAGAATCCCTTACTATCCTTCAAGAAGCTGTGGAGAGAATTAAGAAAGCACTCGCCCCTCTCAGCTCTGCTGCACTCCGTTAA 1260 0.4706 MEKKQSSAAAMGVDDSLNPRVDAVKPSRTVAISDQANALVQAGVPVIRLAAGEPDFDTPAPIAEAGINAIREGHTRYTPNAGTLQLRQAISHKLKEENGITYAPDHIVLSNGAKQSLAQAVLAVCSPGDEVIIPAPYWVSYPEMARLADAVPVILPTSIDNHFLLDPKLLQSKITQRSRLLILCSPSNPTGSVYPKKLLQDIAIVANHPRLLILSDEIYEHIIYAPATHTSFASLPGMWDRTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACGKIQSQFTTGPNSIAQKAGVAALGLGYAGGEIVANMVKAFRERRDFLVKSFREMEGLKISEPQGAFYLFIDLSYYYGREAEGFGRIDDSESLCRYLLDKGQVALVPGSAFGDDTCVRISYAESLTILQEAVERIKKALAPLSSAALR* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2854 419 Gene3D - 76 297 IPR015421 GO:0003824
Ahy3g2854 419 MobiDBLite consensus disorder prediction 1 20 - -
Ahy3g2854 419 Gene3D Aspartate Aminotransferase, domain 1 30 404 IPR015422 GO:0003824
Ahy3g2854 419 CDD AAT_like 47 408 - -
Ahy3g2854 419 Pfam Aminotransferase class I and II 45 406 IPR004839 GO:0009058|GO:0030170
Ahy3g2854 419 PANTHER GLUTAMATE-OXALOACETATE TRANSAMINASE5 8 415 - -
Ahy3g2854 419 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 247 260 IPR004838 GO:0003824|GO:0009058|GO:0030170
Ahy3g2854 419 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 8 415 - -
Ahy3g2854 419 SUPERFAMILY PLP-dependent transferases 17 410 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2854 Ahy-Chr3 124046007 124049452 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2854 K15849 - gmx:100776446 690.649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3181 13 127471174 127476238 Ahy3g2854 3 124046007 124049452 hybridization
Ahy3g2854 3 124046007 124049452 Ahy20g1215 20 22648251 22651835 PCT
Ahy3g2854 3 124046007 124049452 Ahy10g0900 10 14867668 14871351 PCT