Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3181 ATGGAGAAGAAGCAGAGTAGTGCAGTGGCCATGGGGGTTGATGACTCGTTGAGCCCGCGAGTCGACGCCGTGAAGCCTTCAAGGACTGTGGCCATAAGCGACCAAGCAAACGCACTGGTTCAAGCTGGCGTCCCCGTTATTCGCCTGGCCGCGGGGGAGCCCGATTTTGACACTCCCGCTCCCATTGCTGAGGCTGGAATTAATGCAATTCGTGAAGGCCATACAAGGTACACCCCCAACGCCGGAACATTACAATTACGCCAGGCCATTTCTCATAAGCTCAAAGAGGAGAACGGGATCACTTACGCCCCTGATCATATTGTGCTTAGTAATGGAGCCAAGCAAAGTCTTGCCCAGGCCGTTCTTGCAGTTTGCTCCCCGGGAGACGAGGTCATTATTCCTGCTCCATATTGGGTGAGTTACCCAGAAATGGCAAGGTTGGCTGATGCGGTACCTGTCATTCTTCCAACATCAATAGATAATAATTTCCTTTTGGACCCCAAACTCCTTCAATCCAAAATTACTCAAAGATCAAGGCTTCTCATTCTTTGCTCGCCATCTAACCCAACAGGATCTGTCTACCCCAAGAAATTACTTCAAGACATAGCCCACATTGTAGCAAACCACCCCAGGCTTCTGATTCTCTCTGATGAGATTTACGAGCATATCATTTATGCACCAGCAACTCATACAAGCTTTGCATCACTACCAGGAATGTGGGACAGAACCTTAACTGTGAACAGATTTTCCAAGGCCTTTGCAATGACTGGATGGCGGCTTGGATATATTGCTGGTCCAAAACATTTTGTTGCAGCATGTGGAAAGATTCAAAGTCAGTTCACTACAGGGCCCAATAGCATAGCTCAGAAAGCTGGAGTTGCAGCGTTAGGACTAGGCTATGCTGGTGGGGAAATTGTAGCTAATATGGTGAAAGCATTTCGGGAGCGACGAGATTTCTTGGTTAAAAGTTTTAGGGAAATGGAGGGTCTTAAAATATCAGAACCCCAGGGGGCATTTTATCTATTCATTGATTTCAGCTACTACTATGGAAAAGAAGCTGAAGGATTTGGTAGAATTGATGATTCGGAGTCCCTTTGTCGATATCTTCTGGATAAGGGCCAGGTGGCCTTGGTGCCTGGGAGTGCATTTGGAGATGATACTTGTGTTCGGATATCATATGCAGAATCCCTTACTATCCTTCAAGAAGCTGTGGAGAGAATTAAGAAAGCACTCGCCCCTCTCAGCTCTGCTGCACTCCGTTAA 1263 0.4727 MEKKQSSAVAMGVDDSLSPRVDAVKPSRTVAISDQANALVQAGVPVIRLAAGEPDFDTPAPIAEAGINAIREGHTRYTPNAGTLQLRQAISHKLKEENGITYAPDHIVLSNGAKQSLAQAVLAVCSPGDEVIIPAPYWVSYPEMARLADAVPVILPTSIDNNFLLDPKLLQSKITQRSRLLILCSPSNPTGSVYPKKLLQDIAHIVANHPRLLILSDEIYEHIIYAPATHTSFASLPGMWDRTLTVNRFSKAFAMTGWRLGYIAGPKHFVAACGKIQSQFTTGPNSIAQKAGVAALGLGYAGGEIVANMVKAFRERRDFLVKSFREMEGLKISEPQGAFYLFIDFSYYYGKEAEGFGRIDDSESLCRYLLDKGQVALVPGSAFGDDTCVRISYAESLTILQEAVERIKKALAPLSSAALR* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3181 420 SUPERFAMILY PLP-dependent transferases 17 411 IPR015424 -
Ahy13g3181 420 Gene3D Aspartate Aminotransferase, domain 1 30 405 IPR015422 GO:0003824
Ahy13g3181 420 Gene3D - 76 298 IPR015421 GO:0003824
Ahy13g3181 420 CDD AAT_like 47 409 - -
Ahy13g3181 420 PANTHER GLUTAMATE-OXALOACETATE TRANSAMINASE5 9 416 - -
Ahy13g3181 420 Pfam Aminotransferase class I and II 45 407 IPR004839 GO:0009058|GO:0030170
Ahy13g3181 420 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 9 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3181 Ahy-Chr13 127471174 127476238 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3181 K15849 - gmx:100776446 695.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3181 13 127471174 127476238 Ahy13g3181 13 127471174 127476238 ECH
Ahy13g3181 13 127471174 127476238 Ahy3g2854 3 124046007 124049452 hybridization
Ahy13g3181 13 127471174 127476238 Ahy20g1215 20 22648251 22651835 PCT
Ahy13g3181 13 127471174 127476238 Ahy10g0900 10 14867668 14871351 PCT