Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2757 ATGCCGTGCCAGGACTCGGAGCTGAAGGCGGCGAAGACTGCGTACCGGAGCGCCAGGGTTGAGGGTAACCACCGCGAGGAGGCGCGTTGGGCCAACGTCATTGGCGACATTCACAAGAACAGAGGAGAGTACGTGGAAGCCCTCAAATGGCTCCGAATCGATTACGATGTTTCGCTAAAATACTTGCTGGAAAAGGATTTGCTCCCTACCTGCCAATCCATCGGCGAGATGTACCTCCGCCTCGAGCAGTTCTCTGAAGCTCTAACTTACCAGAAGAAGCACTTGGAGCTTGCAAGAGACGCTGACGATGTGGTTGAGCAGCAAAGAGCGAGCACGCAGCTAGGTCGAACATACCACGAGCTGTTCTCGAGATCCGATCACGACCACAACTCAATTCGCAACGCGAAGAAGTATTTCAACTTCGCAATGGAGCTTGCAGTGGCTCTGAAGAAGAAACCGCCAAGCAGCAAGTCTTCGTTCCTGAAGGAGTATATCGATGCGCACAACAACAAAGGGATGCTGGAAATGGAGCTCGATAACTTCCAGGAAGCGAAGGAGATACTAACTCGAGGGTTGGAAATTTGTGATGAGGAGGAGGTTAGTGAATTTGATGATGGGAGGAGCAGGCTCCACCATAACCTTGGGAATGTGTACATGGAACTCAGGAATTGGAATGAAGCTAGGAGGAATATCAAAATGGACATTCAGATTTGTAACAAGATTGGCCACCGTCAAGGGGAAGCGAAAGGGTATATCAATCTTGGGGAATTGCATTCCAGGACTCAGAAGTATGAGGAGGCAATCTGTTTTTATAACAAGGCACTTGGTTTGGCAAGGTCCTTGGAGGATGAGGATGCTTTGGTGAGGCAAATTGAGCAGAATATTAGGACTGTAAAGGAAGCTGTCAAAGTGATGGATGAGATAAAGAAGGAAGAGCAGAACCTCAAGAAGCTTAAAAGAGATATCGCCGCTGCCAGAGGGACACCTAATGAGCGGAAATGCCTGCTCCAGCAGAATGGCTCTCTTGAACGCCTTGTGGAGAAGTCAAGAATGATATCTGCATGGGAGAAGCATTGCGAATTTGCAAAGGAGAAAAAGAGAATAGCAAGTGAACTTTGTGACAAGCAAAGGCTTGGTGATTCATATATGGATGTTGGAGAATCATATCAGAAGCTTAGAAAATTCAACAAAGCAATCAAATGGTACAAGAAGAGTTGGGAAATGTACCAAACAATTGGCAGTTTAGAGGGTCAAGCATTGGTAAAAATCAATATTGGCAATGTTTTGGATTCTGCTCAAAAGTGGAGACAAGCATTAGATGCATATACTGAAAGCTATAGGATTGCTGTTGAAGCTCAACTTCCTGATATACAGCTTTCTGCATTAGAAAATATGCATTATAGTAACATGATAAGATTTGATGATGAATCTGAGACAAAGAGGTTGAAAATTTTAATTGATAAGCTGAAGAACTCAATAGAAGATGAGTCAGGTGCTAAAAATATGGCAGAAGATTGTTGCTCTGAGACTGATACTGAGGCAGACAATAATCTGTCAATAGCTGGGTCTGATGATGACCTTTGCTCTCCACATACCAGTTCTAGATCAAAAGCTCTATCTACTGGAGAAGAATTTATAGATGACATGCCGCTTCTGTCAATCTATCAGTCCTTAAAAGGCTCATCCAGAAAGACAACAGGTCACATGGAAGATCTTACCAACACCAAGCAAGCTGATAAGTCATCCAAAAGTCTTACAAATTTAACCGGCAATCATCAGGCAGTTGTTGGACGTAAACGTGTCCGTGTAATTCTTTCTGATGATGAAGATGAGATGGAGTGTTCAAGCAAACGGAGTCATGATTGCGTGTTAGAAGACAGGTCTACTTATGATGCAAATATGAGTAAAGTGAGTCCTAGTAACATTAAGGTTGTCTCAGAGAATGGATCCAAACTTCCAATTAATGTTGAAGAAAGTAGCAGTTCTTTCAAATGCTGGAGTCCACATACACTTGCTAAAACTTGCAGACATTCCAGATCCACGAGCAATGACCTAGTTGCTGAACTTGATCTTCCTAGTGGTTCTAAATGCAACACAGATGCCTCTGGTAAACCAAGTGATGCTGCCCCTCCTGCGTCAAATAGTTCTCAATACGATAAATATATTGAGTGCCAGATTGGGAATGATCTAATTCACATAGAAGCAACCTGGTGTACTGCCAGTGATAAGCTGGATATTGAATCTTTGAAAGCTGTAGCTGCATGCTTATACTATCTACAACTTCCTACACAAAAGAGATCAGATGGTCTGTTGCCTGTTGTTCAGCACATTTTATGTGCTGGAAGAGATCTAGAATCCCTAGAAACTGTTGAAAACCTTCAGATATGCCTGGGAAATGTCACAGTTGAAGCATCCATTGATGGATGGATTCATAAGCGCCTCATAAAAATGTATGTAGACTTTTGCAAGCAGCTGTCAGAGAAGCCAAATATGAAGGTACTGAAGAAACTCTACAATCTAGAGGTTTCGGATGATGAAATAGTAGTGTCTGAGTGTGACCTGCAAGATTTGTCTATAACCCCATTGATAAATGCACTGCAGTCCCAAAAAGCATTTTCAATGCTTGACCTCTCTCACAATTTGTTAGGAAATGGGACAATGGAAGCACTTCAGAAGGTCTTCACAGCATCAGACCAACATTATGGTGACTTAACACTCGATTTGCATTGTAATCGATTTGGTCCAACCGCTCTGCTACAGATTTGTGAATGCTCAGTGCTGTTTGATAGACTGGAAGTGCTCAACATTTCTGGAAATCGTCTTACTGATGCATGTGGATCTTATCTTTCAACTATCTTGAAAAAATGTAAAGGACATAACAGCCCTGTATCTGGAAATACTATAGTTAATCTTTTGTCCAAGCTTTCCACTTTGAAAAGGTTTTCGGAGCTGAATCTCAGTGGTCTAAAACTAGGCAAACCAGTAGTTGATGCCCTTTGCCAGCTTGCAGGTACCTTGAGTTTATCAGGACTAATTCTTGGAGGTACCAGTATCGGAACAGAAGGGGTAATGCAATTAGCAGAACCATTGCTGAAAGGGGCTGAAGAGTTTGTGAAACTTGATCTATCATATTGTGGGCTCACATCAAACTTTGTTTCAAATATCAATGTTAATTTGTTTTGTTCCATCCTTGAGCTGAACCTGGAAGGAAATCCTATTCTGCCTGAGGGCGGAAATACTCTATGTTCTCTTCTAGTAAACCCATCATGCTCTCTCAAAGTGTTGGTCCTTAGAAAGTGTCAACTTGGGCTCGCTGGGGTTCTCCACATAATTGAGGCACTCGCAGAGAACAACAGCCTGGAGGAGCTTAATCTTGCTGATAATACTGTACCAAATGAACTTTATTCTCTAAAATCCGACTTAACAGTAAAAGGTGACACTGAAAAACACGACCAGATACTTGATACGATTAAGTTGGCGGGTAATCAAGAGGTCCATTGCTCTGTAAACTTGGACTACCATCAGCTTGAAGTTGCTGATAGTGAAGATGATACAGTTAAAGCAGCTGCTTCTGGAATAGATGACAGTGCCAGTTCGTGTCAAAGAAATTCTTCATCTGCAGAGTGCCTTTTAACTCAACAACTTGCAGTGGCTATTGGTAAGGCAAAGAAATTGCAATTACTAGACCTTAGCAACAATGCTTTTTCATCGGAAGCTGCAGAAACTTTCTATAATTCCTGGACAAGTGTACGGGTGCCAAGTCAGAAGCACATTAATGAGGGGATTATGCATTTCTCAACAAAAGAAAAGAAGTGCTGCAGAGTGAAACCGTGCTGCAAAAAAGTCCTGCCTTTATAG 3858 0.4246 MPCQDSELKAAKTAYRSARVEGNHREEARWANVIGDIHKNRGEYVEALKWLRIDYDVSLKYLLEKDLLPTCQSIGEMYLRLEQFSEALTYQKKHLELARDADDVVEQQRASTQLGRTYHELFSRSDHDHNSIRNAKKYFNFAMELAVALKKKPPSSKSSFLKEYIDAHNNKGMLEMELDNFQEAKEILTRGLEICDEEEVSEFDDGRSRLHHNLGNVYMELRNWNEARRNIKMDIQICNKIGHRQGEAKGYINLGELHSRTQKYEEAICFYNKALGLARSLEDEDALVRQIEQNIRTVKEAVKVMDEIKKEEQNLKKLKRDIAAARGTPNERKCLLQQNGSLERLVEKSRMISAWEKHCEFAKEKKRIASELCDKQRLGDSYMDVGESYQKLRKFNKAIKWYKKSWEMYQTIGSLEGQALVKINIGNVLDSAQKWRQALDAYTESYRIAVEAQLPDIQLSALENMHYSNMIRFDDESETKRLKILIDKLKNSIEDESGAKNMAEDCCSETDTEADNNLSIAGSDDDLCSPHTSSRSKALSTGEEFIDDMPLLSIYQSLKGSSRKTTGHMEDLTNTKQADKSSKSLTNLTGNHQAVVGRKRVRVILSDDEDEMECSSKRSHDCVLEDRSTYDANMSKVSPSNIKVVSENGSKLPINVEESSSSFKCWSPHTLAKTCRHSRSTSNDLVAELDLPSGSKCNTDASGKPSDAAPPASNSSQYDKYIECQIGNDLIHIEATWCTASDKLDIESLKAVAACLYYLQLPTQKRSDGLLPVVQHILCAGRDLESLETVENLQICLGNVTVEASIDGWIHKRLIKMYVDFCKQLSEKPNMKVLKKLYNLEVSDDEIVVSECDLQDLSITPLINALQSQKAFSMLDLSHNLLGNGTMEALQKVFTASDQHYGDLTLDLHCNRFGPTALLQICECSVLFDRLEVLNISGNRLTDACGSYLSTILKKCKGHNSPVSGNTIVNLLSKLSTLKRFSELNLSGLKLGKPVVDALCQLAGTLSLSGLILGGTSIGTEGVMQLAEPLLKGAEEFVKLDLSYCGLTSNFVSNINVNLFCSILELNLEGNPILPEGGNTLCSLLVNPSCSLKVLVLRKCQLGLAGVLHIIEALAENNSLEELNLADNTVPNELYSLKSDLTVKGDTEKHDQILDTIKLAGNQEVHCSVNLDYHQLEVADSEDDTVKAAASGIDDSASSCQRNSSSAECLLTQQLAVAIGKAKKLQLLDLSNNAFSSEAAETFYNSWTSVRVPSQKHINEGIMHFSTKEKKCCRVKPCCKKVLPL* 1286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2757 1285 SUPERFAMILY TPR-like 23 121 IPR011990 GO:0005515
Ahy3g2757 1285 SUPERFAMILY TPR-like 375 454 IPR011990 GO:0005515
Ahy3g2757 1285 Pfam Tetratricopeptide repeat 208 279 - -
Ahy3g2757 1285 MobiDBLite consensus disorder prediction 520 540 - -
Ahy3g2757 1285 SMART tpr_5 248 281 IPR019734 GO:0005515
Ahy3g2757 1285 SMART tpr_5 68 101 IPR019734 GO:0005515
Ahy3g2757 1285 SMART tpr_5 419 452 IPR019734 GO:0005515
Ahy3g2757 1285 SMART tpr_5 208 241 IPR019734 GO:0005515
Ahy3g2757 1285 SMART tpr_5 165 198 IPR019734 GO:0005515
Ahy3g2757 1285 SMART tpr_5 379 412 IPR019734 GO:0005515
Ahy3g2757 1285 SMART LRR_RI_2 1005 1032 - -
Ahy3g2757 1285 SMART LRR_RI_2 1117 1143 - -
Ahy3g2757 1285 SMART LRR_RI_2 1060 1087 - -
Ahy3g2757 1285 SMART LRR_RI_2 1089 1116 - -
Ahy3g2757 1285 SMART LRR_RI_2 928 955 - -
Ahy3g2757 1285 SMART LRR_RI_2 1222 1249 - -
Ahy3g2757 1285 SMART LRR_RI_2 869 896 - -
Ahy3g2757 1285 MobiDBLite consensus disorder prediction 562 589 - -
Ahy3g2757 1285 PANTHER PROTEIN TONSOKU 958 1281 IPR044227 GO:0005634|GO:0006325|GO:0009933|GO:0040029|GO:0072423
Ahy3g2757 1285 PANTHER PROTEIN TONSOKU 1 957 IPR044227 GO:0005634|GO:0006325|GO:0009933|GO:0040029|GO:0072423
Ahy3g2757 1285 SUPERFAMILY RNI-like 835 1247 - -
Ahy3g2757 1285 Gene3D Tetratricopeptide repeat domain 315 471 IPR011990 GO:0005515
Ahy3g2757 1285 Gene3D Tetratricopeptide repeat domain 2 314 IPR011990 GO:0005515
Ahy3g2757 1285 Pfam Tetratricopeptide repeat 380 405 IPR019734 GO:0005515
Ahy3g2757 1285 Pfam Tetratricopeptide repeat 166 194 IPR019734 GO:0005515
Ahy3g2757 1285 MobiDBLite consensus disorder prediction 520 541 - -
Ahy3g2757 1285 Coils Coil 281 328 - -
Ahy3g2757 1285 ProSiteProfiles TPR repeat profile. 379 412 IPR019734 GO:0005515
Ahy3g2757 1285 ProSiteProfiles TPR repeat profile. 248 281 IPR019734 GO:0005515
Ahy3g2757 1285 Gene3D Ribonuclease Inhibitor 821 1254 IPR032675 -
Ahy3g2757 1285 SUPERFAMILY TPR-like 149 284 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2757 Ahy-Chr3 121348699 121357211 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2757 - - aprc:113856161 1859.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3091 13 124719063 124727392 Ahy3g2757 3 121348699 121357211 hybridization