Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2637 ATGGCCAAGGAGGGTGCAGATTCAGCAGATCTTCACCACCGTGAATCTGATATAGAACTCATTGGTGCTGAAAAATCCCAGGATGAAAGAAACCTGGTTGAGGTGACTATGGATATTCAAGGTGACTCAGTTGCCTTACGCAGCGTTAAAAGTGTTGATGAATTGGTAGAAGATGAGAAATCAGGTTTGATTGGTAGGAAGCTGGAGAAGAAAGCCTCGTTTGGTGCATCTGTTGTGCAAAATGCAACTAACCGTATGAAGCAGCTGAAGCGTTTGGCTTCATTTTCAAAGCCATCCCCTTCAAAGAAATTCGACAGGACCAAGTCCACTGTGGCTCATGCTCTTTCTGGGCTCAAGTTTATCAGCAAAACTGATGGTGGTGCAGGTTGGGATGAGGTTCAGAACAGGTTTGACAAGCTTACTGCTGCCACTGATGGAAATCTTCCTCGTTCTCTCTTTGGCAAATGCATAGGAATGAACGAGCAGTCTAAGGCGTATGCAGAGAAGCTTTTCGATACTCTTGCCCGCCAGAGGGGTATTCAGGGTGATTCCATTAACAAGCTCCAGTTGAGGGATTTCTGGGACCGTATTTCAGATCAGAGCTTTGATAATAGGCTCAGAACATTCTTTGACATGGTTGATAAAGATGCAGATGGCAGGATCACTGAGGAAGAAATTAAAGAGATCATATGTCTAAGCGCCACAGCAAACAACCTCACAAACATACAAAAGCAAGCAGAAGAATATGCAGCTTTGATAATGGAAGAACTAGACCCGGATGACGCTGGATATATAATGATAGACAACTTGGAGACACTGTTATTACACGGACCAGATCAAACTACAAGAGGAGACAGCAAGTACCTGAGCCAAATGCTAAGCCAAAAGCTTACACCTACTTTTATGAACAATCCTATTAGAAGATGGTACAGAGATAGCAAGTACTTCTTGCAGGACAATTGGCAGAGAGTATGGGTTTTGGTGCTATGGATTTGCATCATGTTAGGTCTCTTTGCTTATAAATTTGTGCAGTATCGGAATAGAGCAGCGTATGACGTGATGGGCCACTGTGTATGCATGGCAAAAGGTGCAGCTGAGACACTTAAATTGAACATGGCTCTTATTCTGTTACCTGTTTGCCGAAACACCATCACCTGGCTCAGGAACAGAACCAAGCTAGGCGTTGCGGTTCCTTTTGATGACAATCTCAACTTCCACAAGGTGATAGCTGTGGCAATAGCAATTGGTGTTGCGGTACATGCTATATATCATCTTACTTGTGATTTTCCTCGCCTTCTTCATGCAAGCCCTGAAAAGTACGAGCTCATGAAACCTTTTTTTGGAGACAAACCATCAAACTATTTGTACTATGTTACATCATGGGAAGGAGTAACAGGGATTGTAATGGTTCTGCTAATGGCAATAGCCTTTACATTGGCCAACCCCAGATTCAGAAGAGGCCGGGCCAAACTACCCAAACATCTACAGAAACTCACAGGTTTCAATGCCTTCTGGTACTCCCATCACCTCTTCGTAATCGTCTATGTCCTATTGGTTGTGCATGGAATCAAACTTTACTTGACCCACAAATGGTACAAGAAAACGACTTGGATGTATTTGGCTGTTCCTATCATCATTTATGCATTGGAAAGACTGATTAGAGCACTAAGATCGAGCACAGAATCTGTGAAAATATTGAAGGTGGCTGTTTATCCCGGCAATGTGTTATCACTGCATATGTCAAAGCCTCCAGGGTTTAGCTACAAGAGTGGACAATACATGTTCGTCAATTGCGCTGCTGTCTCTCCATTTGAATGGCATCCATTTTCCATAACCTCCGCCCCGGATGATAATTACCTAAGCGTTCATATTAAAATACTTGGTGATTGGACTGGAAATCTGAAAGCCAAATTCGTTAAGGCGTGCCAGCCACCCCTCAATGGCCAGAGTGGACTTCTAAGAGCTGACTGCATCAAAGGAGACAGCCAACCGAGTACTTTCCCAAAAGTCCAAGTTGATGGTCCGTATGGAGCGCCAGCGCAAGACTACAGGGAGTATGAGGTGGTTCTGTTAGTGGGGCTGGGAATTGGGGCTACCCCAATGATAAGTATACTGAAGGACATAGTTAACAATTTCAAGGTGATGGACGAGGAGTACGGAGAAGGTGGATTAGGTGGTTCTAGATCAGCCACAAACCAACAAAAGAAGGCAAGGTTAGGGGAGTTCAAGACAAGGAGAGCATACTTCTATTGGGTTACCAGGGAACAGGGTTCCTTTGATTGGTTTAAAGGGGTGATGAACGAAGCAGCTGAAGAGGACCACAGAGGAGCCATTGAGCTCCACAGCTACTGCACTAGCGTCTATGAAGAAGGTGACGCTCGATCTGCTCTTATCACTATGCTACAGTCTATAAACCATGCAAAGAGTGGCGTGGACATTGTCTCTGGCACTCGTGTCATGTCTCACTTCGCCAAACCTAATTGGCGCAGTGTCTACAAGCGCATTGCGCTGAACCATCCACATGCCCGCGTTGGGGTCTTTTACTGTGGGTCACCCGCTCTCACTAAGCAGCTTCGTCAGCTGTCTTTGGATTTCTCTCACAACACCTCCACCAAATTTGAATTCCATAAAGAAAATTTCTGA 2643 0.4476 MAKEGADSADLHHRESDIELIGAEKSQDERNLVEVTMDIQGDSVALRSVKSVDELVEDEKSGLIGRKLEKKASFGASVVQNATNRMKQLKRLASFSKPSPSKKFDRTKSTVAHALSGLKFISKTDGGAGWDEVQNRFDKLTAATDGNLPRSLFGKCIGMNEQSKAYAEKLFDTLARQRGIQGDSINKLQLRDFWDRISDQSFDNRLRTFFDMVDKDADGRITEEEIKEIICLSATANNLTNIQKQAEEYAALIMEELDPDDAGYIMIDNLETLLLHGPDQTTRGDSKYLSQMLSQKLTPTFMNNPIRRWYRDSKYFLQDNWQRVWVLVLWICIMLGLFAYKFVQYRNRAAYDVMGHCVCMAKGAAETLKLNMALILLPVCRNTITWLRNRTKLGVAVPFDDNLNFHKVIAVAIAIGVAVHAIYHLTCDFPRLLHASPEKYELMKPFFGDKPSNYLYYVTSWEGVTGIVMVLLMAIAFTLANPRFRRGRAKLPKHLQKLTGFNAFWYSHHLFVIVYVLLVVHGIKLYLTHKWYKKTTWMYLAVPIIIYALERLIRALRSSTESVKILKVAVYPGNVLSLHMSKPPGFSYKSGQYMFVNCAAVSPFEWHPFSITSAPDDNYLSVHIKILGDWTGNLKAKFVKACQPPLNGQSGLLRADCIKGDSQPSTFPKVQVDGPYGAPAQDYREYEVVLLVGLGIGATPMISILKDIVNNFKVMDEEYGEGGLGGSRSATNQQKKARLGEFKTRRAYFYWVTREQGSFDWFKGVMNEAAEEDHRGAIELHSYCTSVYEEGDARSALITMLQSINHAKSGVDIVSGTRVMSHFAKPNWRSVYKRIALNHPHARVGVFYCGSPALTKQLRQLSLDFSHNTSTKFEFHKENF* 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2637 880 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 684 880 IPR039261 -
Ahy3g2637 880 Gene3D - 677 880 IPR039261 -
Ahy3g2637 880 SUPERFAMILY Riboflavin synthase domain-like 562 678 IPR017938 -
Ahy3g2637 880 MobiDBLite consensus disorder prediction 1 25 - -
Ahy3g2637 880 PANTHER RESPIRATORY BURST OXIDASE-LIKE PROTEIN D 25 880 - -
Ahy3g2637 880 CDD NOX_Duox_like_FAD_NADP 565 880 - -
Ahy3g2637 880 Gene3D Translation factors 549 644 - -
Ahy3g2637 880 Pfam Ferric reductase like transmembrane component 363 519 IPR013130 -
Ahy3g2637 880 SFLD NADPH oxidase subgroup (NOX) 35 880 - -
Ahy3g2637 880 Pfam Respiratory burst NADPH oxidase 103 203 IPR013623 GO:0004601|GO:0050664
Ahy3g2637 880 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 558 682 IPR017927 GO:0016491
Ahy3g2637 880 SUPERFAMILY EF-hand 130 278 IPR011992 -
Ahy3g2637 880 Pfam Ferric reductase NAD binding domain 686 862 IPR013121 GO:0016491
Ahy3g2637 880 ProSitePatterns EF-hand calcium-binding domain. 214 226 IPR018247 -
Ahy3g2637 880 ProSiteProfiles EF-hand calcium-binding domain profile. 201 236 IPR002048 GO:0005509
Ahy3g2637 880 Pfam FAD-binding domain 562 679 IPR013112 GO:0016491
Ahy3g2637 880 PANTHER NADPH OXIDASE 25 880 - -
Ahy3g2637 880 Gene3D - 104 222 - -
Ahy3g2637 880 PRINTS Cytochrome B-245 heavy chain signature 668 681 IPR000778 GO:0016020|GO:0016491
Ahy3g2637 880 PRINTS Cytochrome B-245 heavy chain signature 501 521 IPR000778 GO:0016020|GO:0016491
Ahy3g2637 880 PRINTS Cytochrome B-245 heavy chain signature 691 708 IPR000778 GO:0016020|GO:0016491
Ahy3g2637 880 PRINTS Cytochrome B-245 heavy chain signature 409 427 IPR000778 GO:0016020|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2637 Ahy-Chr3 117482513 117487447 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2637 23 880 Miscellaneous Gene Families AT5G51060 64.384 0.0 1162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2637 K13447 - gmx:100814238 1413.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2978 13 120024936 120029936 Ahy3g2637 3 117482513 117487447 hybridization
Ahy3g2637 3 117482513 117487447 Ahy8g2562 8 48532703 48540563 PCT
Ahy8g2562 8 48532703 48540563 Ahy3g2637 3 117482513 117487447 PCT