Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2978 ATGGCCAAGGAGGGTGCAGATTCAGCAGATCTTCACCACCGTGAATCTGATATAGAACTCATTGGTGCTGAAACTCAAAGGGGACAAAAATCCCAGGATGAAAGAAACCTGGTTGAGGTGACAATGGATATTCAAGGTGGCTCAGTTGCCTTACGCAGCGTTAAAACTGTTGATGAATTGGTAGAAGATGAGAAATCAGGTTTGATTGGTAGGAAGCTGGAGAAGAAAGCCTCGTTTGGTGCATCTGTTGTGCAAAATGCAACCAACCGTATGAAGCAGCTGAAGCGTTTGGCTTCATTTTCAAAGCCATCGCCTTCAAAGAAATTCGACAGGACCAAGTCCACTGTGGCTCATGCTCTTTCTGGGCTCAAGTTTATCAGCAAAACTGATGGTGGTGCAGGTTGGGATGAGGTTCAGAACAGGTTTGACAAGCTTACTGCTGCCACTGATGGAAATCTTCCCCGTTCTCTCTTTGGAAAATGCATAGGAATGAACGAGCAGTCTAAGGCGTATGCAGAGAAGCTTTTCGATACTCTTGCCCGCCAGAGGGGTATTCAGGGTGATTCCATTAACAAGCTCCAGTTGAGGGATTTCTGGGACCGTATTTCAGATCAGAGCTTTGATAATAGGCTCAGAACATTCTTTGACATGGTTGATAAAGATGCAGATGGCAGGATCACTGAGGAAGAAATTAAAGAGATCATATGTCTAAGCGCCACAGCAAACAACCTCACAAACATACAAAAGCAAGCAGAAGAATATGCAGCTTTGATAATGGAAGAACTAGACCCGGATGACGCTGGATATATAATGATAGACAACTTGGAGACACTGTTATTACACGGACCAGATCAAACTACAAGAGGAGACAGCAAGTACCTGAGCCAAATGCTAAGCCAAAAGCTTACACCTACTTTTATGAACAATCCTATTAGAAGATGGTACAGAGATACCAAGTACTTCTTGCAGGACAATTGGCAGAGAGTATGGGTTTTGGTGCTATGGATTTGCGTCATGTTAGGTCTCTTTGCTTATAAATTTGTGCAGTATCGGAATAGAGCAGCGTATGAGGTGATGGGCCACTGTGTATGCATGGCAAAAGGTGCAGCTGAGACACTTAAATTGAACATGGCTCTTATTCTGTTACCTGTTTGCCGAAACACCATCACCTGGCTCAGGAACAGAACCAAGCTAGGCGTTGCGGTTCCTTTTGATGACAATCTCAACTTCCACAAGGTGATAGCTGTGGCAATAGCAATTGGTGTTGCGGTACATGCTGTATATCATCTTACTTGTGATTTTCCTCGCCTTCTTCATGCAAGCCCTGAAAAGTACGAGCTCATGAAACCTTTTTTTGGAGACAAACCATCAAACTATTTGTACTATGTTACATCATGGGAAGGAGTAACAGGGATTGTAATGGTTCTGCTAATGGCAATAGCCTTTACATTGGCCAACCCCAGATTCAGAAGAGGCCGGGCCAAACTACCCAAACATCTACAGAAACTCACAGGTTTCAATGCCTTCTGGTACTCCCATCACCTCTTCGTAATCGTCTATGTCCTATTGGTTGTGCATGGAATCAAACTTTACTTGACCCACAAATGGTACAAGAAAACGACTTGGATGTATTTGGCTGTTCCTATCATCATTTATGCATTGGAAAGACTGATTAGAGCACTAAGATCGAGCACAGAATCTGTGAAAATATTGAAGGTGGCTGTTTATCCCGGCAATGTGTTATCACTGCATATGTCAAAGCCTCCAGGGTTTAGCTACAAGAGTGGACAATACATGTTCGTCAATTGCGCTGCTGTCTCTCCATTTGAATGGCATCCATTTTCCATAACCTCCGCCCCGGATGATAATTACCTAAGCGTTCATATTAAAATAATTGGTGATTGGACTGGAAATCTGAAAGCTAAATTCGTGAAGGCGTGCCAGCCACCCCTCAATGGCCAGAGTGGACTTCTAAGAGCTGACTGCATCAAAGGAGACAGCCAACCGAGTACTTTCCCAAAAGTCCAAGTTGATGGTCCGTATGGAGCGCCAGCGCAAGACTACAGGGAGTATGAGGTGGTTCTGTTAGTGGGGCTGGGAATTGGGGCTACCCCAATGATAAGTATACTGAAGGACATAGTTAACAATTTCAAGGTGATGGACGAGGAGTACGGAGAAGGTGGATTAGGTGGTTCTAGATCAGCCACAAACCAACAAAAGAAGGCAAGGTTAGAGGAGTTCAAAACAAGGAGAGCATACTTCTATTGGGTTACCAGGGAACAGGGTTCCTTTGATTGGTTTAAAGGGGTGATGAACGAAGCAGCTGAAGAGGACCACAGGGGAGCCATTGAGCTCCACAGCTACTGCACTAGCGTCTATGAAGAAGGTGACGCTCGATCTGCTCTTATCACTATGCTACAGTCTATAAACCATGCAAAGAGTGGCGTGGACATTGTCTCTGGCACTCGTGTCATGTCTCACTTCGCCAAACCTAATTGGCGCAGTGTCTACAAGCGCATTGCGCTGAACCATCCACATGCCCGCGTTGGGGTCTTTTACTGTGGGTCACCCGCTCTCACTAAGCAGCTTCGTCAGCTGTCTTTGGATTTCTCTCACAACACCTCCACCAAATTTGAATTCCATAAAGAAAATTTCTGA 2658 0.4485 MAKEGADSADLHHRESDIELIGAETQRGQKSQDERNLVEVTMDIQGGSVALRSVKTVDELVEDEKSGLIGRKLEKKASFGASVVQNATNRMKQLKRLASFSKPSPSKKFDRTKSTVAHALSGLKFISKTDGGAGWDEVQNRFDKLTAATDGNLPRSLFGKCIGMNEQSKAYAEKLFDTLARQRGIQGDSINKLQLRDFWDRISDQSFDNRLRTFFDMVDKDADGRITEEEIKEIICLSATANNLTNIQKQAEEYAALIMEELDPDDAGYIMIDNLETLLLHGPDQTTRGDSKYLSQMLSQKLTPTFMNNPIRRWYRDTKYFLQDNWQRVWVLVLWICVMLGLFAYKFVQYRNRAAYEVMGHCVCMAKGAAETLKLNMALILLPVCRNTITWLRNRTKLGVAVPFDDNLNFHKVIAVAIAIGVAVHAVYHLTCDFPRLLHASPEKYELMKPFFGDKPSNYLYYVTSWEGVTGIVMVLLMAIAFTLANPRFRRGRAKLPKHLQKLTGFNAFWYSHHLFVIVYVLLVVHGIKLYLTHKWYKKTTWMYLAVPIIIYALERLIRALRSSTESVKILKVAVYPGNVLSLHMSKPPGFSYKSGQYMFVNCAAVSPFEWHPFSITSAPDDNYLSVHIKIIGDWTGNLKAKFVKACQPPLNGQSGLLRADCIKGDSQPSTFPKVQVDGPYGAPAQDYREYEVVLLVGLGIGATPMISILKDIVNNFKVMDEEYGEGGLGGSRSATNQQKKARLEEFKTRRAYFYWVTREQGSFDWFKGVMNEAAEEDHRGAIELHSYCTSVYEEGDARSALITMLQSINHAKSGVDIVSGTRVMSHFAKPNWRSVYKRIALNHPHARVGVFYCGSPALTKQLRQLSLDFSHNTSTKFEFHKENF* 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2978 885 Pfam FAD-binding domain 567 684 IPR013112 GO:0016491
Ahy13g2978 885 ProSiteProfiles EF-hand calcium-binding domain profile. 206 241 IPR002048 GO:0005509
Ahy13g2978 885 Gene3D - 682 885 IPR039261 -
Ahy13g2978 885 Gene3D - 109 227 - -
Ahy13g2978 885 Pfam Respiratory burst NADPH oxidase 108 208 IPR013623 GO:0004601|GO:0050664
Ahy13g2978 885 SFLD NADPH oxidase subgroup (NOX) 56 885 - -
Ahy13g2978 885 PANTHER RESPIRATORY BURST OXIDASE-LIKE PROTEIN D 28 885 - -
Ahy13g2978 885 MobiDBLite consensus disorder prediction 1 33 - -
Ahy13g2978 885 Gene3D Translation factors 554 649 - -
Ahy13g2978 885 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 563 687 IPR017927 GO:0016491
Ahy13g2978 885 Pfam Ferric reductase like transmembrane component 368 524 IPR013130 -
Ahy13g2978 885 CDD NOX_Duox_like_FAD_NADP 570 885 - -
Ahy13g2978 885 PANTHER NADPH OXIDASE 28 885 - -
Ahy13g2978 885 SUPERFAMILY Riboflavin synthase domain-like 567 683 IPR017938 -
Ahy13g2978 885 PRINTS Cytochrome B-245 heavy chain signature 414 432 IPR000778 GO:0016020|GO:0016491
Ahy13g2978 885 PRINTS Cytochrome B-245 heavy chain signature 506 526 IPR000778 GO:0016020|GO:0016491
Ahy13g2978 885 PRINTS Cytochrome B-245 heavy chain signature 696 713 IPR000778 GO:0016020|GO:0016491
Ahy13g2978 885 PRINTS Cytochrome B-245 heavy chain signature 673 686 IPR000778 GO:0016020|GO:0016491
Ahy13g2978 885 SUPERFAMILY EF-hand 135 284 IPR011992 -
Ahy13g2978 885 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 689 885 IPR039261 -
Ahy13g2978 885 MobiDBLite consensus disorder prediction 1 21 - -
Ahy13g2978 885 ProSitePatterns EF-hand calcium-binding domain. 219 231 IPR018247 -
Ahy13g2978 885 Pfam Ferric reductase NAD binding domain 691 867 IPR013121 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2978 Ahy-Chr13 120024936 120029936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2978 28 885 Miscellaneous Gene Families AT5G51060 64.041 0.0 1160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2978 K13447 - gmx:100814238 1415.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2978 13 120024936 120029936 Ahy3g2637 3 117482513 117487447 hybridization
Ahy13g2978 13 120024936 120029936 Ahy8g2562 8 48532703 48540563 PCT
Ahy8g2562 8 48532703 48540563 Ahy13g2978 13 120024936 120029936 PCT