Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2220 ATGTCCACCTCTGATCCCAACAAGTTGATAACCAAAGCTGATAAGCTAACAAAACTCAGTTTCACAAGGTGGACTGCGGATTGGAAAAGTGCTACAGTTCTTTATGAGCAGGCTGCTAATGCATTTAGACTTGCCAAGGACTATGAGAAAGCCAAAACAGCATATGAGAAAGCTTCAAAAGGACAAGAGATGCTTTCTTCACCATGGGATGCCGCTAAGCACATGGAGTCTGCTGCTGCGTTAGCAAAGGAACTAAGCAACTGGAGAGAAGTTGCCGATTTCTATCGTAGGGCATCTGAATTGTACATTGAGTGTGGGAGACCACAGCCTGCATCCGACGCCCTTGCCAAGGGAGCGCGTGCATTGGAAGATACCGTGCCTGAAGAAGCTATTCAGCTATATACAGATGCTTGTACAGTTCTTGAAGAGGATGAAAGAGAACAAATGGCTTTTGATTTGTATCGTGCTGCAACCAATGTTTATATAAAACTTGAGAAATATACAGACGCTGCATCTCTCATGTTGAAATTGGGCTTGGCAGCTGAGAAGTCTAATGCTATCAATAGCCAATTCAAGGCGTATCTTAGTGCGGTTATTATCTACCTTTATGCTCATGACTTTAAGCAAGCAGAGAAGTGCTACAATGACATTTCCCAGGTTGATGCTTTCCTCAGCAGCGACCAGAACCGTTGTGCTAGCAAGCTTCTTGCTGCTTACACAGATGGAGATGTTGAAGAAATCAAACGTGTTGCTCAGTCGAGCACTATTTCACATCTTGACCATGTGATCATTAAGCTTGCAAGGAAACTCCCAACAGGAGATGTGAGCGCACTAAAGGGCGAAACTGCTGAAGGGGAAGAAGCACCACTTGATGAAAATGATCTGACGTAA 891 0.4422 MSTSDPNKLITKADKLTKLSFTRWTADWKSATVLYEQAANAFRLAKDYEKAKTAYEKASKGQEMLSSPWDAAKHMESAAALAKELSNWREVADFYRRASELYIECGRPQPASDALAKGARALEDTVPEEAIQLYTDACTVLEEDEREQMAFDLYRAATNVYIKLEKYTDAASLMLKLGLAAEKSNAINSQFKAYLSAVIIYLYAHDFKQAEKCYNDISQVDAFLSSDQNRCASKLLAAYTDGDVEEIKRVAQSSTISHLDHVIIKLARKLPTGDVSALKGETAEGEEAPLDENDLT* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2220 296 Pfam Soluble NSF attachment protein, SNAP 5 266 - -
Ahy3g2220 296 PANTHER SOLUBLE NSF ATTACHMENT PROTEIN SNAP 3 283 IPR000744 GO:0006886
Ahy3g2220 296 PANTHER GAMMA-SOLUBLE NSF ATTACHMENT PROTEIN 3 283 - -
Ahy3g2220 296 Gene3D Tetratricopeptide repeat domain 1 272 IPR011990 GO:0005515
Ahy3g2220 296 SUPERFAMILY TPR-like 6 250 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2220 Ahy-Chr3 73040243 73047200 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2220 K21198 - gmx:100790986 504.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2460 13 59351817 59358693 Ahy3g2220 3 73040243 73047200 hybridization