Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2460 ATGTCCACCTCTGATCCCAACAAGTTGATAACCAAAGCTGATAAGCTAACAAAACTCAGTTTCACAAGGTGGACTGCGGATTGGAGAAGTGCTACAGTTCTTTATGAGCAGGCTGCTAATGCATTTAGACTTGCCAAGGACTACGAGAAAGCCAAAACAGCATATGAGAAAGCTTCAAAAGGACAAGAGATGCTTTCTTCACCATGGGATGCCGCTAAGCACATGGAGTCTGCTGCTGCGTTAGCAAAGGAACTAAGCAACTGGAGAGAAGTTGCCGATTTCTATCGTAGGGCATCTGAATTGTACATTGAGTGTGGGAGACCACAGCCTGCATCCGACGCCCTTGCCAAGGGAGCCCGTGCATTGGAAGATACCATGCCTGAAGAAGCCATTCAGCTATATACAGATGCTTGTACAGTTCTTGAAGAGGATGAAAGAGAACAAATGGCATTTGATTTGTATCGTGCTGCAGCCAATGTTTATATAAAACTTGAGAAATATACAGACGCCGCATCTCTCATGTTGAAATTGGGCTTGGCAGCTGAGAAGTCTAATGCTATCAATAGCCAATGCAAGGCATATCTTAGTGCGGTTATTATCTACCTTTATGCTCATGACTTTAAGCAAGCAGAGAAGTGCTACAATGACTGTTCCCAGGTTGATGCTTTCCTCAGCAGCGACCAGAACCGTTGTGCTAGCAAGCTTCTTGCTGCTTACACAGATGGAGATGTTGAAGAAATCAAACGTGTTGCTCAGTCGAGCACTATTTCACATCTTGACCATGTGATCATTAAGCTTGCAAGGAAACTCCCAACAGGCGATGTGAGCGCACTAAAGGGCAGAACTGCTGAAGGGGAAGAAGCACCACTTGATGAAAACGATCTGACATAA 891 0.4489 MSTSDPNKLITKADKLTKLSFTRWTADWRSATVLYEQAANAFRLAKDYEKAKTAYEKASKGQEMLSSPWDAAKHMESAAALAKELSNWREVADFYRRASELYIECGRPQPASDALAKGARALEDTMPEEAIQLYTDACTVLEEDEREQMAFDLYRAAANVYIKLEKYTDAASLMLKLGLAAEKSNAINSQCKAYLSAVIIYLYAHDFKQAEKCYNDCSQVDAFLSSDQNRCASKLLAAYTDGDVEEIKRVAQSSTISHLDHVIIKLARKLPTGDVSALKGRTAEGEEAPLDENDLT* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2460 296 PANTHER SOLUBLE NSF ATTACHMENT PROTEIN SNAP 3 283 IPR000744 GO:0006886
Ahy13g2460 296 Gene3D Tetratricopeptide repeat domain 1 272 IPR011990 GO:0005515
Ahy13g2460 296 SUPERFAMILY TPR-like 6 250 IPR011990 GO:0005515
Ahy13g2460 296 Pfam Soluble NSF attachment protein, SNAP 5 266 - -
Ahy13g2460 296 PANTHER GAMMA-SOLUBLE NSF ATTACHMENT PROTEIN 3 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2460 Ahy-Chr13 59351817 59358693 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2460 K21198 - gmx:100790986 510.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2460 13 59351817 59358693 Ahy3g2220 3 73040243 73047200 hybridization