Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2071 ATGAAGAGGGGCTTCAATGGAGTTTTTAAAAGGAAAAAGCTTTCCTTTTTTTCTTTTTTGTTAATGTCCACAACTATCATATTATTGTCATGGGAGAGTCTTTCTGCACTTATTCCCCCTTATTCACAAATGTTGCTTCCTTCAGAATTTTTCTCAAGTTTGACGAATGAAGAAGCAGTTCTCCTTGAAGCAGGGGATATCCATGGAGTACCCACTTTAGAAAAAGAAGAAAATAGTAGAACAAATTCTATCATTGGCTTTCTAGAGAATGAATCTACAGAAAATAATGAAGATGTTATTCCAAATTTGTTCAATGAAGAAATAGAAGATAAAAGTTTAGAGCAAGAACATACGTTAGATTCTATAAGGGATTCTCCACACAATGGATCTTTAATGAATGAAGATTGTAACTACGCAAAAGGAAAATGGGTGATCGACAACCATAGACCTTTGTATTCAGGATTTGGTTGTAAACGATGGTTGTCAGGATCATGGGCTTGTCGCTTAACGCAACGCACTGATTTTGCATATGAAAATCTTCGATGGCAACCAAAAGATTGTGAATTAGAGGAATTTCAAAGATCAAAATTTCTTACAAGGATGCAACACAAAACTTTGGCATTTGTTGGAGACTCATTAGGCCGTCAACAGTTTCAGTCCTTAATGTGCATGATCACCGGTGGTGAGGAAATGCAAAATGTGGAAGATGTTGGAATAGAATATGGATTAGTTAAACCTGAGGGTGGTACTCACCCCCATGGTTATGCATACCGTTTCATAACCACTAATACTACCATTCTATACTATTGGTCTTCAACTCTCTGTGATACTCAACCTATTGATCCTACTGATCCGGAATCAGATGTTGCAATGCACCTTGACCAGCCTCCAGCATTCTTGCAGAAATATCTTCACAAGATACATGTGCTAGTTCTCAACACAGGTCACCATTGGAATCGAGGAAAGCTGAAAGCTAATCGTTGGGTAATTTATATTAATGGTGTGCGAAGCACGGAGAAGGAGTTAGCAATGATTTGGCGCGCTAAGAATTTTACTGTTCATAGCGTGGTTAGTTGGGTGAATTCACAGATTCCGAAATATCCAAATTTAAAGGTGTTCTTTAGAAGCATCTCTCCAAGGCATTTTGTTGGTGGTGATTGGGACACAGGAGGCAGTTGTAATAATACTACACCAATGTCAGTGGGAAAGGAGATATTAGAAGAAGAGTCTAGCGATTTAAGTGTTGCAAGTGCTGTGAAAGGGACTGCAGTTAAGCTCTTGGATATAACAGCTCTTTCTCAACTTAGAGACGAGGCTCATTTATCACGTTTTAGAATGACACCTAATCCTGCTGCTGTTCAAGATTGTTTACACTGGTGTTTACCTGGTGTTCCTGATACATGGAATGAATTACTCTTTGCACAAATCTAG 1431 0.3843 MKRGFNGVFKRKKLSFFSFLLMSTTIILLSWESLSALIPPYSQMLLPSEFFSSLTNEEAVLLEAGDIHGVPTLEKEENSRTNSIIGFLENESTENNEDVIPNLFNEEIEDKSLEQEHTLDSIRDSPHNGSLMNEDCNYAKGKWVIDNHRPLYSGFGCKRWLSGSWACRLTQRTDFAYENLRWQPKDCELEEFQRSKFLTRMQHKTLAFVGDSLGRQQFQSLMCMITGGEEMQNVEDVGIEYGLVKPEGGTHPHGYAYRFITTNTTILYYWSSTLCDTQPIDPTDPESDVAMHLDQPPAFLQKYLHKIHVLVLNTGHHWNRGKLKANRWVIYINGVRSTEKELAMIWRAKNFTVHSVVSWVNSQIPKYPNLKVFFRSISPRHFVGGDWDTGGSCNNTTPMSVGKEILEEESSDLSVASAVKGTAVKLLDITALSQLRDEAHLSRFRMTPNPAAVQDCLHWCLPGVPDTWNELLFAQI* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2071 476 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 14 9 476 - -
Ahy3g2071 476 Pfam PMR5 N terminal Domain 135 188 IPR025846 -
Ahy3g2071 476 PANTHER N-ACETYLNEURAMINATE 9-O-ACETYLTRANSFERASE 9 476 - -
Ahy3g2071 476 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 191 474 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2071 Ahy-Chr3 49524455 49537482 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2071 - - adu:107479167 974.156
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2363 13 51772542 51785260 Ahy3g2071 3 49524455 49537482 hybridization
Ahy1g1766 1 93911316 93918182 Ahy3g2071 3 49524455 49537482 PCT
Ahy3g2071 3 49524455 49537482 Ahy1g1766 1 93911316 93918182 PCT