Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2363 ATGAAGAGGGGCTTCCATGGATTTTTTAAAAGGAAAAAGCTTTCCTTTTTTTCTATTTTGTTAATGTCCACAACTATCATATTATTGTCATGGGAGAGTCTTTCTGCACTTATTCCCCCTTATTCACAAATGTTGCTTCCTTCAGAATTTTTTTCAAGTTTGACGAATGAAGAAGCAGAAGTTCTCTTTGAAGCAGGGGATATCCATGGAGTACCCACTTTAGAAAAAGAAGAACATAGTAGAACAAATTCTATCATTGGCTTTCTAGAAAATGGATCTACAACAAATAATGAAGATTGTAACTACGCAAAAGGAAAATGGGTGATCGACAACCATAGACCTTTGTATTCAGGATTTGGTTGTAAACGATGGTTGTCAGGATCATGGGCTTGTCGCTTAACGCAACGCACTGATTTTGCATATGAAAACCTTCGATGGCAACCAAAAGATTGTGAATTAGAGGAATTTCAAGGATCAAAATTTCTTACAAGGATGCAACACAAAACTTTGGCATTTGTTGGAGACTCATTAGGCCGTCAACAGTTTCAGTCCTTAATGTGCATGATCACCGGTGGAGAGGAAATGCAAGATGTGGAAGATGTTGGAATAGAATATGGATTAGTTAAACCTGAGGGTGGTACTCACCCCCATGGTTATGCATACCGTTTCATAACCACTAATACTACCATTCTATACTATTGGTCTTCAACTCTCTGTGATACTCAACCTATTGATGCTACTGATCCGGAATCAGATGTTGCAATGCACCTTGACCAGCCTCCAGCATTCTTGCAGAAATATCTTCACAAGATACATGTGCTAGTTCTCAACACAGGTCACCATTGGAATCGAGGAAAGCTGAAAGCTAATCGTTGGGTAATTCATATTAATGGTGTGCGAAGCAGGGAGAAGGAGTTAGCAATGATTTGGCGCGCTAAGAATTTCACTGTTCATAGCGTGGTTAGTTGGGTGAATTCAGAGATTCCGAAATATAGAAATTTGAAGGTGTTCTTTAGAAGCATGTCTCCAAGGCATTTTGTTGGTGGTGATTGGGACACAGGAGGCAGTTGCAATAATACTACACCAATGTCAGTGGGAAAGGAGATATTAGAAGAAGAGTGTAGCGATTTAAGTGTTGCAAGTGCTGTGAAAGGGACTGCAGTTAAGCTCTTGGATATAACAGCTCTTTCTCAACTTAGAGACGAGGCTCATTTATCACGTTTTAGAATGACACCTAATCCTGCTGCTGTTCAAGATTGTTTACACTGGTGTTTACCTGGTGTTCCTGATACATGGAATGAATTACTCTTTGCACAAATCTAG 1323 0.3953 MKRGFHGFFKRKKLSFFSILLMSTTIILLSWESLSALIPPYSQMLLPSEFFSSLTNEEAEVLFEAGDIHGVPTLEKEEHSRTNSIIGFLENGSTTNNEDCNYAKGKWVIDNHRPLYSGFGCKRWLSGSWACRLTQRTDFAYENLRWQPKDCELEEFQGSKFLTRMQHKTLAFVGDSLGRQQFQSLMCMITGGEEMQDVEDVGIEYGLVKPEGGTHPHGYAYRFITTNTTILYYWSSTLCDTQPIDATDPESDVAMHLDQPPAFLQKYLHKIHVLVLNTGHHWNRGKLKANRWVIHINGVRSREKELAMIWRAKNFTVHSVVSWVNSEIPKYRNLKVFFRSMSPRHFVGGDWDTGGSCNNTTPMSVGKEILEEECSDLSVASAVKGTAVKLLDITALSQLRDEAHLSRFRMTPNPAAVQDCLHWCLPGVPDTWNELLFAQI* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2363 440 Pfam PMR5 N terminal Domain 99 152 IPR025846 -
Ahy13g2363 440 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 155 438 IPR026057 GO:0016740
Ahy13g2363 440 PANTHER N-ACETYLNEURAMINATE 9-O-ACETYLTRANSFERASE 90 440 - -
Ahy13g2363 440 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 14 90 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2363 Ahy-Chr13 51772542 51785260 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2363 - - adu:107479167 847.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2363 13 51772542 51785260 Ahy13g2363 13 51772542 51785260 ECH
Ahy13g2363 13 51772542 51785260 Ahy3g2071 3 49524455 49537482 hybridization
Ahy1g1766 1 93911316 93918182 Ahy13g2363 13 51772542 51785260 PCT
Ahy13g2363 13 51772542 51785260 Ahy1g1766 1 93911316 93918182 PCT