Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2042 ATGGTACCTACCAAAACTACACCAAAATCTTCAAAAACCATCGACTCTATGCATCCGCACACTCCCACCCAAACCAACGAACCCTCTTCGTTTCCCCCTCGTAGACGCAGTCTCCGCCTCAATTCCATTCCAAACTCCGATCCTCCCCAATTCGGTGCTGTCGATGGTTCAACCGCAACCGCCGTTAGGGTTTCCAATGACACCGACTCTGGCCCCACCGGAAACGCCGCCAGTGGAAAGGGAAAAAGAAAGGGCAGGTCAGCTGTTTCCGGAACAGCAACTGTCAAGTTGGACGAGAGTGGGAAGGGTTTTCTGAACTTACGGTCAGGAAAGAAGGTTCTCATGAGAGGAATGGAAGCAAACCAATATAACGCTGTCAGTAACGGCGATCCGGGAAGTGGTAGCGCCAAGCGTGGTAGGAAAACCATATCACAGAAAAGCGAAGAAGAAGAAGAAGAAGAGCAGCAAAAGTGTGAAACGAAGGACACAAATAGTTATGTTGATGCGGTGAAGATCGAGAAGCAGAATATTGATGAGGGTTTGGAAAATGTTGTTTCTGGTAATAGTGGGAAGAGGAAACTGGGCGGCGGTAGCAGCAGCAGAGATGCGGTTACGGTGGAAGTTGGAAGCATGAGTGTGGGACGAAGGAGACTCAGCAGGGAAGAGAAAGGGAAATCTGCGGTTGTTGCTAATGGCGAACCACCACGCAATGCTGTTGCTCATGAAACTACATTGGAGAATGGATCAGATGCCAAGCTCCCTTCAGAAGAGGGTAATGCAGTTCCTGTCCAAATGAGAGCTCGAGAACGATCAAGAGACACTAACAACAACAACAATAACAATGGTAATCAAAGAGAGCATGGCTCGAATAGGATGGACCGGTTTAGGGACATAGCCAGGGAGAACGCATCCCGATTTGCTCATTTCACTGCTGAAGATGAAGAAAACACCAATGACAATTCGGTTCCTGAGCCTGAAGTTGAGCATGAGATTGAGGATTGGCCAGGTCCTTTCTCAACGGCTATGAAGATCATACGGGATAGGGAGAAGAAGAGTTTTCAAACAGGGTGTGGGCCTTCGGAAAGAAGCTTAGTGGAGTCTATTAAGTGGGTTCCTAAGAGGAATCAAGCGCTAACCGGTAGAAAGTTCTTGGCCCCTTCATTGCAGGAGCTTTGCCTTGATATTCTTGCTCGGAATGTTGATGACATAGCTTCACTTGACAGTGTGCCTGATTCCCTGAGGCACAGGCTTAGCCAATTGTTGTGTGACTCGGATAGGATTACCGATCACTTTTTTGGACTACTTGTTTGTGGATCGCCCACAGAGATTCGGTTGAGGAATTGCTCTTGGCTGTCGGAGGAGCACTTTATTAAATGTTTCCAAATGTGTGACACTACCAATTTGGTGGTGCTGCAACTCGACCAGTGTGGGCGATGTTTGGCAGATTATGTAATATATGCTACTTTGGCACAATCAAGGGGGCACTTGCCTAGATTAACTAGCCTATCCATTACGGGTGCATGTCGTCTTTCAGATTTAGGGTTGCGAGCACTTGTCTCTTCTGCTCCAGCACTTAGATCAGTCAACCTCAGCCGGTGCTCCCTTCTCACATCTTCTGGCATTTTTCATTTGGCTGAATCATTAAGATCTCTTCTAAAGGAATTGTATCTCGATGAATGCAATGGCATTGATGCTGCACTGGTTCTGCCAGCACTTCTGGAGCTTGAACATTTGGAAGTTTTGTCAGTAGCCAGTGTTAAAACTGTTTGTGATGAATTTGTCAAGGATTACATCACTGCTCGGGGTCACAACTTAAAAGAGCTCGTTTTACAAAATTGTGTAAATGTGACAGATGCATCAATAAAAATCATTGCAGAACATTGTCATGGATTATGCGTGCTTGATATTATGCACTTGGAGACATTAACAGATTTATCCATAGGTTATCTAAGTAATCATTGCCGTGCACTTCATACACTGAAGCTTTGCCGTAATCATTTCAGTGATGAAGCCATTGCTGCATTTTTGGAGACAAGTGGGGAGTCCTTGCAAGAACTGTCACTTAATAGTGTTAAGAAGGTTGGCTACCACACAGCCCTATCACTTGCAAGCCATGCAAAAAATTTGCGTGCTCTAGATCTATCTTGGTGCCGAAATTTGACAGACAATGCATTGGGTTTAATAGTAGATAGCTGCTCGTCACTGATATCACTTAATCTTTTTGGATGCACACAGGTAACAGATATTTTTCTGAAGGGCCACTCAAACATGCAGCTTGAGATAATTGGTTTGCAGAACTCTCCTTTGTTGCGTCATGTCAAAGTCCCTGATCCTTATCAGGGTGCTTTGAATTATTCGTCAGTATCCATGGATGGTGTATAA 2382 0.4534 MVPTKTTPKSSKTIDSMHPHTPTQTNEPSSFPPRRRSLRLNSIPNSDPPQFGAVDGSTATAVRVSNDTDSGPTGNAASGKGKRKGRSAVSGTATVKLDESGKGFLNLRSGKKVLMRGMEANQYNAVSNGDPGSGSAKRGRKTISQKSEEEEEEEQQKCETKDTNSYVDAVKIEKQNIDEGLENVVSGNSGKRKLGGGSSSRDAVTVEVGSMSVGRRRLSREEKGKSAVVANGEPPRNAVAHETTLENGSDAKLPSEEGNAVPVQMRARERSRDTNNNNNNNGNQREHGSNRMDRFRDIARENASRFAHFTAEDEENTNDNSVPEPEVEHEIEDWPGPFSTAMKIIRDREKKSFQTGCGPSERSLVESIKWVPKRNQALTGRKFLAPSLQELCLDILARNVDDIASLDSVPDSLRHRLSQLLCDSDRITDHFFGLLVCGSPTEIRLRNCSWLSEEHFIKCFQMCDTTNLVVLQLDQCGRCLADYVIYATLAQSRGHLPRLTSLSITGACRLSDLGLRALVSSAPALRSVNLSRCSLLTSSGIFHLAESLRSLLKELYLDECNGIDAALVLPALLELEHLEVLSVASVKTVCDEFVKDYITARGHNLKELVLQNCVNVTDASIKIIAEHCHGLCVLDIMHLETLTDLSIGYLSNHCRALHTLKLCRNHFSDEAIAAFLETSGESLQELSLNSVKKVGYHTALSLASHAKNLRALDLSWCRNLTDNALGLIVDSCSSLISLNLFGCTQVTDIFLKGHSNMQLEIIGLQNSPLLRHVKVPDPYQGALNYSSVSMDGV* 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2042 793 PANTHER UNCHARACTERIZED 80 787 - -
Ahy3g2042 793 MobiDBLite consensus disorder prediction 122 165 - -
Ahy3g2042 793 MobiDBLite consensus disorder prediction 178 291 - -
Ahy3g2042 793 Gene3D Ribonuclease Inhibitor 373 677 IPR032675 -
Ahy3g2042 793 MobiDBLite consensus disorder prediction 308 333 - -
Ahy3g2042 793 SMART LRR_CC_2 496 521 IPR006553 -
Ahy3g2042 793 SMART LRR_CC_2 706 731 IPR006553 -
Ahy3g2042 793 SMART LRR_CC_2 654 678 IPR006553 -
Ahy3g2042 793 SMART LRR_CC_2 732 753 IPR006553 -
Ahy3g2042 793 SMART LRR_CC_2 522 547 IPR006553 -
Ahy3g2042 793 SMART LRR_CC_2 602 627 IPR006553 -
Ahy3g2042 793 SMART LRR_CC_2 628 653 IPR006553 -
Ahy3g2042 793 MobiDBLite consensus disorder prediction 141 165 - -
Ahy3g2042 793 Gene3D Ribonuclease Inhibitor 682 775 IPR032675 -
Ahy3g2042 793 MobiDBLite consensus disorder prediction 1 75 - -
Ahy3g2042 793 MobiDBLite consensus disorder prediction 1 102 - -
Ahy3g2042 793 PANTHER F-BOX/LRR PROTEIN 80 787 - -
Ahy3g2042 793 SUPERFAMILY RNI-like 465 690 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2042 Ahy-Chr3 47099419 47103784 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2042 K15082 - gmx:100808150 720.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2331 13 50077974 50082180 Ahy3g2042 3 47099419 47103784 hybridization
Ahy11g3167 11 149227571 149232349 Ahy3g2042 3 47099419 47103784 PCT
Ahy1g1786 1 94162238 94166887 Ahy3g2042 3 47099419 47103784 PCT
Ahy3g2042 3 47099419 47103784 Ahy11g3167 11 149227571 149232349 PCT
Ahy3g2042 3 47099419 47103784 Ahy1g1786 1 94162238 94166887 PCT