Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1786 ATGATTCCCAATAACAACCATAGTACCCCTAAACCCATTCCTCATCCTTCTTCTTCCTCTAATTCTTCATCAACACCTCAATTTCAGCTTCCATTGTTTTCCCAACCCATGGCTGGGGTTACTCCTATCCCTAACCCCAACCCCAACCCCAACCCTTATCCCCAACAACCACCTCAGCATCATCCAATTCTCAATCCAATACCCGATTTCCCCCAATTCTCAAACCCCGAAGAACCTAGGGATTTCGGGGTTCCTTACGCCACCACTTCCGTTCAAACCCATCCCTGGGTTGACCAAGAAACCAACTTTCAGCCATTTTCAACTGATTTTGGGGTTTCCGATCTAGACATTGACATTGGCTCAATTATTGCCAATTTTCTCAACCCCTCTAACTCCGACTTATTTGGTGGTCCCGATCATGGGGCATCATGGAATGGCGTTGCTGATGAAACAGAAAGAGGCTTTCTCAAGAGAGGAACAGTTGATTATATGGGGGTTACCGTTCCCATTGACGTCGATAATGCCACTCCCAAGCGCACTAAGACAATGGGAGAAGTATGGAACGAGAACCCTGATTTTCAGTTTGATTTTTCTCAAGGTTTCTTTTCGCCGGTGGTGGAGGTGGAGGAAGTGCAAGGTGATCCGAGAGGGAAGAGGAAATTGGATGGTCATGGTGCTGATACCAGTGGTGCCGCTGAAAGGTTGGTTCTTGGTGGTGACAACGGTGGTGGTGGTAATTCCGGTGGTCTCAGGAGGTTAAGCAGAGAGGAGAAAATGAAGGGGCCGGTGATGGAAATTGATTTCTTGGCAAATGCTTTTCATGACGAGGCATTCCGCGCACCTAGACCTGAAAATTCGAACCCTGGCGTTCCGATTGAAATTTCAGATGATGATCATGATGATGATGATGATGGCGGGGTTATAATCCGCCAGCCACCACAGGATTTTGTTAGCTCAAGGAGAAGGGAACGTTTCAGGGACATAGCCAAAGAAAATGCATCTCGGTTTGCCCGGTTCGTGCCGGATGCTAAGGATGAATCATCTAACCCTGAGCCTCCAATTGATGAGGGGCCAACACCTTTTTCGACAGCTTTGAAATTTATCAGAGAGAAAGGGATGAAAAATGTGCAAAATAAATCATGGGTTCCTAAATGGAATCATACAAGACCTAGGATTAAGGTGCCATCATTGAAAGAAATATGCCTAAAAGTTCTTGCCAGCTATGCTGATGCAATTGTGTCACTTGATGGTGTCCCAGAAGACCTGAGGCACAGACTTAGCCAGCTGACCTGTGACTCTCATCGGATGGACTCTCACTTTTTTGAACTTGTTGTTAAAGGGTCTCCCACTGAGATTCGCCTGAGAGATTGCTCATGGATGTCTGAGGATCAATTGACAGAATCTCTCAAAGCGTGTGACACTTCCAAATTGGAGGTGCTACAACTTGACCAATGTGGACGTTGTATACCTGATTATATTGTGACAAAGTCACCGAGGTGGTTACACTTACCTAGATTAATCAGTCTGTCCATCACTGGTGCTTGCCGTCTATCAGATAAGGGGTTGCGAGCACTGATTTCTTCTGCCCCGGCTCTTAGATCGGTAAACCTAAGTCAGTGCTCCCTTCTCACATCTGCCAGTATTAATATTTTGGCTGATTCACTAGGACCACTTCTGAAAGAGTTGTATCTTGATCATTGCCAAAACATCGATACTGCATTAATTGTGCCAGCACTGAAGGCACTTGAAAATTTAGAAGTGCTGTCCTTGGCAGGCGTGGGAACTGTTTGTGATAAATTTATCAAGGATTACATCATTGCCAATGGTCAAAACATGAAGGAGCTTATTTTAAAGGATTGTGTAAAGTTGACTGATGTGTCGATTAAAGTCATTGCTGAACACTGTCCTCTGTTGTGTGTCCTTGATCTCGAGAACTTGCTTAATTTGACAGATTTATCTATAGGATATCTTGCCAATAATTGTCGAGCACTTAACACATTGAAGCTCCCCTGTACACCATTCAGCGATGAAGCAATAGCTGCCTTCATAGAGATCATTGGAGAGTCCTTGAAAGAACTTTCACTCAATAAAATCAAGAAGGTTGGTCAGCATACAGCCGTGTCACTTGCAAGCCATGCGAAAAATCTGCAAGTTCTAGATCTATCTTTTTGCCGAAATTTGACAGACACCGACTTGGGTTTGATTGTGGATAGCTGCTTCTCGCTAAAGTTTCTTATACTTTTTGGATGTACACAGGTTACAGATGTTTTTCTGAAAGGATATTCAAACCCAGAGACCCAGATCATTGGATTGCAGATGTCTCCTTTATTGCAACATGTCAAAGTGCCTGATTATCATCAAGGTGCTTTGCGTTATTCACCGGTACCTGTAAATTCGCCATAA 2403 0.4428 MIPNNNHSTPKPIPHPSSSSNSSSTPQFQLPLFSQPMAGVTPIPNPNPNPNPYPQQPPQHHPILNPIPDFPQFSNPEEPRDFGVPYATTSVQTHPWVDQETNFQPFSTDFGVSDLDIDIGSIIANFLNPSNSDLFGGPDHGASWNGVADETERGFLKRGTVDYMGVTVPIDVDNATPKRTKTMGEVWNENPDFQFDFSQGFFSPVVEVEEVQGDPRGKRKLDGHGADTSGAAERLVLGGDNGGGGNSGGLRRLSREEKMKGPVMEIDFLANAFHDEAFRAPRPENSNPGVPIEISDDDHDDDDDGGVIIRQPPQDFVSSRRRERFRDIAKENASRFARFVPDAKDESSNPEPPIDEGPTPFSTALKFIREKGMKNVQNKSWVPKWNHTRPRIKVPSLKEICLKVLASYADAIVSLDGVPEDLRHRLSQLTCDSHRMDSHFFELVVKGSPTEIRLRDCSWMSEDQLTESLKACDTSKLEVLQLDQCGRCIPDYIVTKSPRWLHLPRLISLSITGACRLSDKGLRALISSAPALRSVNLSQCSLLTSASINILADSLGPLLKELYLDHCQNIDTALIVPALKALENLEVLSLAGVGTVCDKFIKDYIIANGQNMKELILKDCVKLTDVSIKVIAEHCPLLCVLDLENLLNLTDLSIGYLANNCRALNTLKLPCTPFSDEAIAAFIEIIGESLKELSLNKIKKVGQHTAVSLASHAKNLQVLDLSFCRNLTDTDLGLIVDSCFSLKFLILFGCTQVTDVFLKGYSNPETQIIGLQMSPLLQHVKVPDYHQGALRYSPVPVNSP* 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1786 800 MobiDBLite consensus disorder prediction 279 301 - -
Ahy1g1786 800 PANTHER UNCHARACTERIZED 286 793 - -
Ahy1g1786 800 MobiDBLite consensus disorder prediction 41 65 - -
Ahy1g1786 800 SUPERFAMILY RNI-like 450 756 - -
Ahy1g1786 800 MobiDBLite consensus disorder prediction 1 68 - -
Ahy1g1786 800 Gene3D Ribonuclease Inhibitor 692 782 IPR032675 -
Ahy1g1786 800 Gene3D Ribonuclease Inhibitor 413 603 IPR032675 -
Ahy1g1786 800 Gene3D Ribonuclease Inhibitor 604 691 IPR032675 -
Ahy1g1786 800 PANTHER F-BOX/LRR PROTEIN 286 793 - -
Ahy1g1786 800 MobiDBLite consensus disorder prediction 1 34 - -
Ahy1g1786 800 SMART LRR_CC_2 661 685 IPR006553 -
Ahy1g1786 800 SMART LRR_CC_2 713 738 IPR006553 -
Ahy1g1786 800 SMART LRR_CC_2 687 712 IPR006553 -
Ahy1g1786 800 SMART LRR_CC_2 635 660 IPR006553 -
Ahy1g1786 800 SMART LRR_CC_2 529 554 IPR006553 -
Ahy1g1786 800 SMART LRR_CC_2 503 528 IPR006553 -
Ahy1g1786 800 SMART LRR_CC_2 609 634 IPR006553 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1786 Ahy-Chr1 94162238 94166887 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1786 K15082 - gmx:100798274 608.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g3167 11 149227571 149232349 Ahy1g1786 1 94162238 94166887 hybridization
Ahy1g1786 1 94162238 94166887 Ahy13g2331 13 50077974 50082180 PCT
Ahy1g1786 1 94162238 94166887 Ahy3g2042 3 47099419 47103784 PCT
Ahy13g2331 13 50077974 50082180 Ahy1g1786 1 94162238 94166887 PCT
Ahy3g2042 3 47099419 47103784 Ahy1g1786 1 94162238 94166887 PCT