Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g2580 ATGGAGTCAAGGGAACAATTGAAGGAAGAAAGCGCTGAACAAACTGCAAAAGATCTTGAAGAAGTTAACAAAGCTAGAAACCATGATCATGATGAACAACAAAAGCCAGGTGTAATTGGTTCAATGCTAAGAGCAGTTCATGACACATATGAAAGTGCTAAAGATGCTGTTGTTGGCAAAAGAGACAACACTACTACAAATGCAGCATCATCAGATATAACTACAACAAATAAAGGTGAAGAATTTGGAGGATTTGGTGCTGGTGAAGTGAGAGATATCTCTATTGGAAAAGCTAAGAATGCAAAAGATTATACAAAGGAACAAGCTGCTGAAAAGGTAAAAGAATCAAAAGATGCTACAGTGGAAAAGGCAGGTGAATACACAGATTATGCATCACAGAAAGCAAAAGAAACAAAAGATGCTGCATCTCAAAAAGCCAAGGAAACTAAAGATGCAACCATGGATAAGGCTAAGGAAGCCAAGGACAAGACAGTGGAAAAGGGTGGTGAGTACAGAGATTATGCTTCGGAGAAGGCGAAGGAAGGGAAGGACACCACGGTGGGGAAGCTTGGGGAGCTGAAGGAGAGGGCGATGGGTTTCTTGGGAGGCAAGAAAGAAGAAACAAAGCAGAAGAGTGCAGACACAGTTGAAGCAACAAAGGACAAAGCTTATGATATGAAGGAAGCAACAGAGAACAAGGCTTCAGAAACTGCTGAGGCAGCAAAGCACAAAACCACTGAAGCTAAGGACAAGACCAAGGAAAACTTGAGCGGAGCAGAGGAAGAAGCAAGGAGGAAAATGGAAGAGCTTAAGGTGGAAGGTGGAGGAGGATACGACAGAGATCTGGAAACCGCCGCCGCCGGAGACAAGCCGTCAACGGTGAGATTGCAAAAGACGCGACCGGTTGCGGTGGCCGAAGCCTTGAAAGCATCTGACCAGATGACAGGACAGGCCTTCAACGACGTCGGACGGGTCGACGGCGACGGCGACGAAGAAGTTTCCAAGTAA 1008 0.4534 MESREQLKEESAEQTAKDLEEVNKARNHDHDEQQKPGVIGSMLRAVHDTYESAKDAVVGKRDNTTTNAASSDITTTNKGEEFGGFGAGEVRDISIGKAKNAKDYTKEQAAEKVKESKDATVEKAGEYTDYASQKAKETKDAASQKAKETKDATMDKAKEAKDKTVEKGGEYRDYASEKAKEGKDTTVGKLGELKERAMGFLGGKKEETKQKSADTVEATKDKAYDMKEATENKASETAEAAKHKTTEAKDKTKENLSGAEEEARRKMEELKVEGGGGYDRDLETAAAGDKPSTVRLQKTRPVAVAEALKASDQMTGQAFNDVGRVDGDGDEEVSK* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g2580 335 MobiDBLite consensus disorder prediction 1 35 - -
Ahy2g2580 335 MobiDBLite consensus disorder prediction 198 286 - -
Ahy2g2580 335 MobiDBLite consensus disorder prediction 101 169 - -
Ahy2g2580 335 Coils Coil 132 163 - -
Ahy2g2580 335 PANTHER EMBRYOGENESIS ABUNDANT PROTEIN, PUTATIVE-RELATED 121 244 - -
Ahy2g2580 335 MobiDBLite consensus disorder prediction 198 298 - -
Ahy2g2580 335 PANTHER EMBRYOGENESIS ABUNDANT PROTEIN, PUTATIVE-RELATED 19 140 - -
Ahy2g2580 335 PANTHER EMBRYOGENESIS ABUNDANT PROTEIN, PUTATIVE-RELATED 246 330 - -
Ahy2g2580 335 MobiDBLite consensus disorder prediction 1 88 - -
Ahy2g2580 335 PANTHER DAUER UP-REGULATED-RELATED 121 244 - -
Ahy2g2580 335 Coils Coil 242 273 - -
Ahy2g2580 335 Gene3D - 204 257 - -
Ahy2g2580 335 Gene3D - 102 155 - -
Ahy2g2580 335 MobiDBLite consensus disorder prediction 59 78 - -
Ahy2g2580 335 PANTHER DAUER UP-REGULATED-RELATED 19 140 - -
Ahy2g2580 335 PANTHER DAUER UP-REGULATED-RELATED 246 330 - -
Ahy2g2580 335 Pfam Late embryogenesis abundant protein 106 149 IPR004238 -
Ahy2g2580 335 Pfam Late embryogenesis abundant protein 133 160 IPR004238 -
Ahy2g2580 335 Pfam Late embryogenesis abundant protein 150 193 IPR004238 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g2580 Ahy-Chr2 101970446 101972278 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g2580 - - aip:107626431 556.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2995 12 119568371 119570203 Ahy2g2580 2 101970446 101972278 hybridization
Ahy16g1742 16 70884665 70886390 Ahy2g2580 2 101970446 101972278 PCT
Ahy2g2580 2 101970446 101972278 Ahy16g1742 16 70884665 70886390 PCT