Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1742 ATGGCGTCGAGGCAACAATTCAAGGAAGATAGAGCTGAGGCAGCTGCAAAGCTTGCAGCCAAGGACATAGGCGATGTAAACAGAGAAAGAGAGCGTGACGAAGGTTACACGCTCAACTCCGAAAAGGCACGTGCTGAAGCCGCTGCAAAGCTTGCTGCCAAGGATCTTGAAGATGTGAACAGAGCAAGAGACACAGCTACTCTAGGTGTTTCGTACCACCAGCTACAGCAGCAGCAGCAGCAGCAAAACCCTGGTGTTGTAGGGTCCATGTTAAGGGCAGTGCACGACACTATCGAGCACGCAAAGGAAGCTGTGGTAGGGAAGACTCAGGAGACCGGAGAGGCGGTTAGCGACACTGCAAAATGTGTTTCTGAGAAGACAATGGAGACGAAGGACAAAGCAGGTACCAAAGTTGGAGAGTACGCTGGCTATGCTGCTGATAAAGCGAGAGAAACAAAAGATGTAACGATGAACAAGACTGGTGAGTATACAGATTATGCGTCTCAGAAAGCGAAAGATACTAAGGACTATACTGCTGATAAGACTATAGATGCCAAGAACAAGACAATGGAGAAATCTGGCGCGTATAAGGATTATGCTGCGGATAAGGCAAAGGAAGCGAAAGACGCTACAATGCAGAAGGCTGGGGAGTATAAGGATTATGCTGCTGACAAGGCGAAGGAAGCGAAGGATGCTACAAAGCAAAAAGCTGGAGAGTACAAGGATTATGCTGCTGACAAGGCGACGGATGCAAAAGATTATGGTGCTGAGAAGGCAAAGGAAGCGAAAGACGCTACAGTGCAGAAGGCTGGAGAGTACTCAGAGTATACTGCGGAGAAGGCAAAAGAGGGGAAGGACACGACAATTGGGAAGCTTGGGGAGCTGAAAGACTCAGCTGCCGATGCTGCTAAGAGAGCTATGGATTTCTTCACCGGCAAGAAAGAGGAAACCAAGCAGAAGGCCGCAGAGACAACGGAAGCAGCCATGCAGAAGACTAATGAGGCAAAGGAGAAGCCGAGTGGAATAGAGGAAGAAGCAAGGAGAAAAATGGAAGGGATGAGGATGGAGGGAGGAGGAGGCACGGGCGGAGAGAGTAAGGTGTGGATCCGAGTGGAGGAGAGTCGACCTGGGGCGGCAGCAGATGCTTTAAAGGCAGCAGATGAGGCCTTGAATGATGCGGGGCGCCGTGAGAAAATGTGA 1200 0.5025 MASRQQFKEDRAEAAAKLAAKDIGDVNRERERDEGYTLNSEKARAEAAAKLAAKDLEDVNRARDTATLGVSYHQLQQQQQQQNPGVVGSMLRAVHDTIEHAKEAVVGKTQETGEAVSDTAKCVSEKTMETKDKAGTKVGEYAGYAADKARETKDVTMNKTGEYTDYASQKAKDTKDYTADKTIDAKNKTMEKSGAYKDYAADKAKEAKDATMQKAGEYKDYAADKAKEAKDATKQKAGEYKDYAADKATDAKDYGAEKAKEAKDATVQKAGEYSEYTAEKAKEGKDTTIGKLGELKDSAADAAKRAMDFFTGKKEETKQKAAETTEAAMQKTNEAKEKPSGIEEEARRKMEGMRMEGGGGTGGESKVWIRVEESRPGAAADALKAADEALNDAGRREKM* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1742 399 MobiDBLite consensus disorder prediction 1 40 - -
Ahy16g1742 399 MobiDBLite consensus disorder prediction 314 366 - -
Ahy16g1742 399 MobiDBLite consensus disorder prediction 1 41 - -
Ahy16g1742 399 MobiDBLite consensus disorder prediction 330 354 - -
Ahy16g1742 399 Gene3D - 194 244 - -
Ahy16g1742 399 Gene3D - 254 311 - -
Ahy16g1742 399 PANTHER - 42 234 - -
Ahy16g1742 399 PANTHER - 1 36 - -
Ahy16g1742 399 PANTHER - 184 396 - -
Ahy16g1742 399 Coils Coil 42 62 - -
Ahy16g1742 399 Pfam Late embryogenesis abundant protein 275 312 IPR004238 -
Ahy16g1742 399 Pfam Late embryogenesis abundant protein 144 182 IPR004238 -
Ahy16g1742 399 Pfam Late embryogenesis abundant protein 175 218 IPR004238 -
Ahy16g1742 399 Pfam Late embryogenesis abundant protein 252 295 IPR004238 -
Ahy16g1742 399 Pfam Late embryogenesis abundant protein 219 254 IPR004238 -
Ahy16g1742 399 Pfam Late embryogenesis abundant protein 123 163 IPR004238 -
Ahy16g1742 399 Coils Coil 314 334 - -
Ahy16g1742 399 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN ECP63 42 234 - -
Ahy16g1742 399 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN ECP63 1 36 - -
Ahy16g1742 399 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN ECP63 184 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1742 Ahy-Chr16 70884665 70886390 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1742 - - aip:107648779 627.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1742 16 70884665 70886390 Ahy16g1742 16 70884665 70886390 ECH
Ahy16g1742 16 70884665 70886390 Ahy12g2995 12 119568371 119570203 PCT
Ahy16g1742 16 70884665 70886390 Ahy2g2580 2 101970446 101972278 PCT
Ahy12g2995 12 119568371 119570203 Ahy16g1742 16 70884665 70886390 PCT
Ahy2g2580 2 101970446 101972278 Ahy16g1742 16 70884665 70886390 PCT