Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g2474 ATGAGAACAGGAAGTTGTTCTGTGCAACAAGGGCTAACCCCAGAAGCTGCAAGCATAGTGAAGCAGGCCGTGACGCTTGCAAAGCGTCGCGGCCATGCTCAAGTGACGCCACTTCACGTGGCGAACACTATGCTTTCAGATTCTAACGGTTTATTAAGAACAGCTTGTCTCCAGTCTCATTCGCACCCTCTTCAGTGCAAGGCGTTGGAGCTCTGCTTCAACGTTGCACTGAATAGGTTGCCGGCTTCAACCTCGAGCCCCATGTTGGGCAACCATCACCACCCCCACCACTCCCAGTGTCCTTCGATTTCAAACGCCATGGTAGCTGCTTTCAAGCGCGCACAAGCTCACCAGCGACGCGGATCCATTGAGAACCAACAACAACCGTTGTTGGCCGTGAAGATTGAGCTTGAACAACTCATAATCTCAATCTTGGATGACCCTAGTGTTAGTAGGGTTATGAAAGAAGCAGGGTTTTCTAGCACACAAGTCAAGAGCAATGTAGAACAAGCTGTTTCTCTAGAAATATGCTCTCAAAACAACAACACCAACAACAAGAATAACAACAAGCCAAAGGATCATAAAAGTGATGGAGATGACAACAACAACAACAACAAGGTAGTGTTGGATCCGGTAAGAGATGAAGATGTTTCAAGTGTGATAGATAATTTGGTGAGTCAAAGAAGAAGAACAACCGTGATTGTTGGTGAGTGTGTGAAAACTCTTGAAGGTGTAGTTAGAAGGGTGATGGAGAAGTTTGAGAAAGGACAAGTTAGTGAATCCCTTAGAGGTATCAAGTTTCTACCTCTTTCTCTTTCTTCCTTCTCAAATTTTTCAAGATTAGAGGTTGAACAAAAGATTGAAGAGCTTAATAGGAGTCTTGTTAATAACAATAACAATGATAGCAATAAAGGGTGTGTTTTGTATCTTGGAGATCTCAAATGGGTTTTTGATTATTATAGAGACCAAGGAATGAGTAGTAGGGTTTGTTATAGCCCTGTGGATCACATGATAATGGAGATTGCAAAGATGGTGAGTAGTAATAATAATAATAATAATAATGGAAGGTTTTGGTTGATGGGTATTGCAACTTTCCAAGCTTATATGAGATGCAAAAATGGACATCCATCAATGGAGAATCTTTGGGGTCTTCACCCCATTACAATCCCTGCTGGAAGCTTGAGTTTGAGCCTCATCACTGACAGTGGTCTACAAAATCAAGCAATAACAAACTCTAAAGCTGACAATAGAACTAGCTGGCTATTACTTGATCAAGAAGGAAGAGGAGGAGGAGTGAGGGGTGATATTAGTAATGATCTTGGAACCTTCTTGGAACCTTCTTCTTCTTCAGCTAAGGTAGTTGAGAACGAAGTTCGAAGCTTGCAAAGTATGAATAGTACTTGTAACAGTGATTCTTCAAGTTCTCTCCTTCCTGCATGGCTTCAACAGTACAAGAATGAGAATAAAGGACTCTCCTCTTCTAATCATCAGGATGTTCAAGTGGGAGAGGTTTCCAAAACTTGGAACAATGCAACTCAAAAACAACCCTACACTATTTGTGATCAAACTCTCACATTATCATCACCTTCTTCATCCAATACTTCTGGTGTTTTTTCCTATGATCACCACCAAAATCCTAACAATATCAACCATATTTGGAATTTAGAAAATCGTAGTAACCGCAATCACAGCCACAGCCAGAACCACAATCAGAATAATGATAAACCCGCTTTGCGAGTTTACATTAGCAACAAAGAAATTGTAGATCATAGTCCATTAACTATCTCACCATTATCAAATCCAAGTTCTTCAAACCCTAATTCCACTTCTTCAAGTGGTGTCATGGAAGCAATGGAGTATGTGAACAACAAATTCAAAGAGCTCAACTTGGAGAATCTAAAAACCCTTTGCAATGCTTTGAAGAACAAAGTTCCATGGCAGAAAGAGATACTACCCGAAATCGCGAGCACCATTTTGCAATGCCGTTCCGGAACAAGGCAAAGAAGGAAAGGAAATAACAACAACAACAATGTGATGATGAAAGAAGAAACATGGTTGTTCTTCCAAGGTGTTGATCTTGAAGCCAAAGAGAAGATAGCAATGGAATTGGCTAGGGTTGTTTTTGGTTCATCAAAGGAAAACTTCATCTCAATATCAATGAGTAGTTTTTCATCATCAACAAGAGCTGATTCATCAATTGAGGACAACAATTCTTGCAGGAACAAGAGATCAAGGGAAGATCCAAGTTGTAGTTACATTGCGCGATTCGGGGAAGCAGTTTGTTCTAACCCTCATAGGGTTTTTCTTGTTGAGGACATTGAACAAGCTGATTATTTCTCTCAACTTGGTTTCAAGAGAGCAATGGAGAGAGGAAAGGTTGAAGATTCAAATGGTGAAGAGGTTTCACTTTGTGATGCTATCATCATTTTGAGTTGTGAGAGTTTTAGTTCAAGATCAAGGGCTTGTTCTCCATTGACAAGACAAAAATCTTGTGAAGGTTCTTCGTCAAGAGAAGACAACACTAATCATAATAATAATAATGATAATGGTGATGGTGTTGCTACTTTGGAGGAGATAAGTCCTTGTGTTTCTTTGGATTTAGATTTGAATATTTCCATTGATGATGATGAATGCAATGATGATCATGATGATCATGGATCCGTGGATGAAATTGGACTTCTTGAATCTGTGGACGGAAAAGTTTTCTTCAAAATTCAGGATTTGTAA 2727 0.3997 MRTGSCSVQQGLTPEAASIVKQAVTLAKRRGHAQVTPLHVANTMLSDSNGLLRTACLQSHSHPLQCKALELCFNVALNRLPASTSSPMLGNHHHPHHSQCPSISNAMVAAFKRAQAHQRRGSIENQQQPLLAVKIELEQLIISILDDPSVSRVMKEAGFSSTQVKSNVEQAVSLEICSQNNNTNNKNNNKPKDHKSDGDDNNNNNKVVLDPVRDEDVSSVIDNLVSQRRRTTVIVGECVKTLEGVVRRVMEKFEKGQVSESLRGIKFLPLSLSSFSNFSRLEVEQKIEELNRSLVNNNNNDSNKGCVLYLGDLKWVFDYYRDQGMSSRVCYSPVDHMIMEIAKMVSSNNNNNNNGRFWLMGIATFQAYMRCKNGHPSMENLWGLHPITIPAGSLSLSLITDSGLQNQAITNSKADNRTSWLLLDQEGRGGGVRGDISNDLGTFLEPSSSSAKVVENEVRSLQSMNSTCNSDSSSSLLPAWLQQYKNENKGLSSSNHQDVQVGEVSKTWNNATQKQPYTICDQTLTLSSPSSSNTSGVFSYDHHQNPNNINHIWNLENRSNRNHSHSQNHNQNNDKPALRVYISNKEIVDHSPLTISPLSNPSSSNPNSTSSSGVMEAMEYVNNKFKELNLENLKTLCNALKNKVPWQKEILPEIASTILQCRSGTRQRRKGNNNNNNVMMKEETWLFFQGVDLEAKEKIAMELARVVFGSSKENFISISMSSFSSSTRADSSIEDNNSCRNKRSREDPSCSYIARFGEAVCSNPHRVFLVEDIEQADYFSQLGFKRAMERGKVEDSNGEEVSLCDAIIILSCESFSSRSRACSPLTRQKSCEGSSSREDNTNHNNNNDNGDGVATLEEISPCVSLDLDLNISIDDDECNDDHDDHGSVDEIGLLESVDGKVFFKIQDL* 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g2474 908 ProSiteProfiles Clp repeat (R) domain profile. 8 175 IPR004176 -
Ahy2g2474 908 MobiDBLite consensus disorder prediction 179 209 - -
Ahy2g2474 908 SUPERFAMILY Double Clp-N motif 12 168 IPR036628 -
Ahy2g2474 908 PANTHER PROTEIN SMAX1-LIKE 3 1 907 - -
Ahy2g2474 908 MobiDBLite consensus disorder prediction 592 613 - -
Ahy2g2474 908 Gene3D - 201 387 IPR027417 -
Ahy2g2474 908 MobiDBLite consensus disorder prediction 827 853 - -
Ahy2g2474 908 Gene3D - 610 849 IPR027417 -
Ahy2g2474 908 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 907 - -
Ahy2g2474 908 Coils Coil 280 300 - -
Ahy2g2474 908 MobiDBLite consensus disorder prediction 726 745 - -
Ahy2g2474 908 Pfam Clp amino terminal domain, pathogenicity island component 135 172 IPR004176 -
Ahy2g2474 908 Pfam Clp amino terminal domain, pathogenicity island component 23 53 IPR004176 -
Ahy2g2474 908 Coils Coil 623 643 - -
Ahy2g2474 908 Gene3D - 9 173 IPR036628 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g2474 Ahy-Chr2 101009250 101013929 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g2474 - - adu:107476159 1562.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2887 12 118607175 118611854 Ahy2g2474 2 101009250 101013929 hybridization