Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g2065 ATGTTGCAACCTTTCACACCCTTCTTTTCCTTTCTTCATAGAAAATCCAAATCACTCCTCAACCTCCCAAAGCCAGCACCGAGTAGTAGTTGCTGTTCATGCTGGTGCTGGAGAAGACAGCGACCCAGAAGAAAATTCTCACCAAGTTTTGATTTTGATGAATTCTCAGCGTCTTTCATAGACATGAATCTGTCAAGGCAGTTCCAACAAGTGTTCAAGCTCATTGATTCCAATGGTGATGGAAAAATCTCAACCACTGAGCTCAGTGAAACTCTTCTATGTCTTGGATACAACAAGTGCATGGCTAAAAAAGAAGCTGAGAGAATGGTGAGAGCTTTGGACTTTAATGGAGATGGGTTTGTTGACTTTGATGAATTCATGGTTGTGATGAGAGAAGGAATAGCAACAACAGAAGAAGGTGGCAAGAACAATAACAATATTGATCAAGATGAGTATCTTATGGATGCTTTTCATGTGTTTGATTCTGATAAGAATGGATTAATCTCTGCTAAGGAATTGAGGAGAGTTTTGGTTAATCTTGGGTGTGATCGTTGCAGCATCAGAGAGTGTAAGCGTATGATCAAAAGTGTTGACAAGAATGGTGATGGGTTTGTTGATTTTGATGAATTTAGATCCATGATGAAAAAGGGACTTTCCAAATCCAAACAAAATTAG 675 0.3911 MLQPFTPFFSFLHRKSKSLLNLPKPAPSSSCCSCWCWRRQRPRRKFSPSFDFDEFSASFIDMNLSRQFQQVFKLIDSNGDGKISTTELSETLLCLGYNKCMAKKEAERMVRALDFNGDGFVDFDEFMVVMREGIATTEEGGKNNNNIDQDEYLMDAFHVFDSDKNGLISAKELRRVLVNLGCDRCSIRECKRMIKSVDKNGDGFVDFDEFRSMMKKGLSKSKQN* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g2065 224 CDD EFh 67 131 IPR002048 GO:0005509
Ahy2g2065 224 ProSiteProfiles EF-hand calcium-binding domain profile. 101 136 IPR002048 GO:0005509
Ahy2g2065 224 Gene3D - 143 224 - -
Ahy2g2065 224 SUPERFAMILY EF-hand 67 216 IPR011992 -
Ahy2g2065 224 ProSitePatterns EF-hand calcium-binding domain. 198 210 IPR018247 -
Ahy2g2065 224 SMART efh_1 105 133 IPR002048 GO:0005509
Ahy2g2065 224 SMART efh_1 189 217 IPR002048 GO:0005509
Ahy2g2065 224 SMART efh_1 152 180 IPR002048 GO:0005509
Ahy2g2065 224 SMART efh_1 67 95 IPR002048 GO:0005509
Ahy2g2065 224 CDD EFh 152 215 IPR002048 GO:0005509
Ahy2g2065 224 ProSitePatterns EF-hand calcium-binding domain. 76 88 IPR018247 -
Ahy2g2065 224 ProSitePatterns S-100/ICaBP type calcium binding protein signature. 109 130 IPR001751 -
Ahy2g2065 224 ProSitePatterns EF-hand calcium-binding domain. 161 173 IPR018247 -
Ahy2g2065 224 ProSiteProfiles EF-hand calcium-binding domain profile. 63 98 IPR002048 GO:0005509
Ahy2g2065 224 ProSiteProfiles EF-hand calcium-binding domain profile. 185 220 IPR002048 GO:0005509
Ahy2g2065 224 Pfam EF-hand domain pair 67 131 IPR002048 GO:0005509
Ahy2g2065 224 Pfam EF-hand domain pair 151 215 IPR002048 GO:0005509
Ahy2g2065 224 Gene3D - 37 142 - -
Ahy2g2065 224 PANTHER CALCIUM BINDING PROTEIN 56 220 - -
Ahy2g2065 224 ProSitePatterns EF-hand calcium-binding domain. 114 126 IPR018247 -
Ahy2g2065 224 ProSiteProfiles EF-hand calcium-binding domain profile. 148 183 IPR002048 GO:0005509
Ahy2g2065 224 PANTHER CALCIUM-BINDING PROTEIN CML25-RELATED 56 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g2065 Ahy-Chr2 95930060 95931009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g2065 153 221 EF-hand Containing Proteins AT1G24620 33.333 5.52e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g2065 - - aip:107628548 423.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2391 12 112067072 112068123 Ahy2g2065 2 95930060 95931009 hybridization