Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g2009 ATGAACTTTCTTTATATCAGCAAACTCAGATCATTGTCTTCTTTGATCCCAGCCAAACTTTTAGGCTTTTGTTCTTGTTTACATACTCGCTCATTGTTGCCCTATGCCAAACACGTCAATTGGAACACAACCCACAGTTTTGTTCATAGAAACCCACTTCTTTCTCTCGTAGAAAGATGTAAATCCTTGATTCAGTTAAAGCAAATTCAAGCTCAAATGACCTTAACAGGCTTAATAGACAATAGCTTTGCTGCAAGTCGCCTTGTTGCTTTCTGCGCGCTCTCAGAATCTCAAACACTTGGATATTGCACAAAAATTTTATTTCATACAAACGAACCAAATGTCTTTTCTTGGAATACGACAATTAGGGGATATATAGAAAGTGGAGACTTAGATGGAGCTCTTGTTTTGTACAAGAAAATGTTGCAGTATGATGGGTTGAAGCCAGATAATCATACTTATCCGTTATTGCTTAAAGCATGTTCTTCTCCTTCTCTAAATTGTGTAGGTCATACTATACTTGGACATGTATTAAAGTTTGGTTTTGAATTTGACTTATTTGTGCACAATGCATTGATCTCTATGCTACTGTCCTATGGGGACTTAGAGGCAGCATATGATGTGTTCAATAGAGGATGTGTGAGGGACCTGGTAACTTGGAATGCGATGATCACGGGATGTGTTAGAAGAGGACTGGAGATTGAGGCTATAAAACTTTATCGGGAAATGGAGGCTGAGAAGGTGAAACCAAATGAAATTACAATGATTGGGTTGGTTTCTTCTTGTTCTCGGTTACATGATTTGAATCTTGGCAGAGAATTTCATTGTTACATCGAAGAACATAAGCTTGAGTTGACAGTTCCACTTATTAATGCACTTATGGACATGTATGTGAAGTGTGGAGACCTATTGTCTGCACAAGTTTTATTTGATAACATGGCACAGAAGACCATTGTTTCATGGACTACAATGGTTTTTGGATACGCCAGATTCGGTTACCTTGATATTGCTAGGAAAATTTTATATAAAGTTCCAGAGAAGAGTGTTGTTCTTTGGAATGCAATCATCAGTGGCTGTGTTCAATCCAAGCATAGTAAGGAGGCATTGACTTTATTCCATGAAATGCAAATTAATAATATAGAGCCTGATAAAGTGACCATGATTAACTGCTTGTGTGCATGTTCACAACTAGGAGCACTTGATGTTGGAATATGGATTCACCATTATATTGAAAGAAAAAATCTTTCTGTAGACGTCACCTTGGGAACTGCTCTAGTTGACATGTATGCCAAGTGTGGAAATATTGACAAGGCTCTCCAAGTTTTTCAAGAGCTTCCTCAAAGAAATTGTTTGACCTGGACAGCCATTATTTGCGGTTTAGCATTTAATGGGAATTCCTGTGATGCTATATACTATTTCTCAGAAATGATTCGTGTTGGATTGATGCCTGATGAGATCACCTTTCTTGGTGTCTTATCAGCTTGTTGCCATGGAGGTTTAGTTGAAGAAGGCCGCAAATATTTTTCCCAAATGAGCTCCAAATTCAATATATTCCCTAAGCTTAAACACTACTCTTGCATGGTGGATCTTCTAGGAAGGGCTGGTCATCTGGAGGATGCTGAAGAGCTTATCCAAAATATGCCTATAGAAGCGGATGCTGCGGTATGGGGTGCTTTATTCTTTGCTTGTCGTGTTCATGGCAATGTTCAGATTGGGAAGAGGGCAGCTATGAAGCTCCTTGAGATGGATCCTCAAGATAGTGGGAATTATGTTCTCCTTGCTAGCATGTACAGTGAAGCAAAAATGTGGAAGGAGGCAAGGAGTGCAAGGAAACTAATGAAGGAAAGAGGGGTAGATAAGCTTCCTGGTTGCAGCTCCATTGAGATCAATGGCATTGTTCATGAGTTTGTGGTAAAGGATGCATTACATCCACAGTCTGAAATGATTTATGAAAGCCTGATTTCTTTGACAAAGCAACTGGAGCTTGAAGTTACATCCGCAGTTCCAGCTTCTAGAGATAATCTTTCCTTCTAA 2034 0.3913 MNFLYISKLRSLSSLIPAKLLGFCSCLHTRSLLPYAKHVNWNTTHSFVHRNPLLSLVERCKSLIQLKQIQAQMTLTGLIDNSFAASRLVAFCALSESQTLGYCTKILFHTNEPNVFSWNTTIRGYIESGDLDGALVLYKKMLQYDGLKPDNHTYPLLLKACSSPSLNCVGHTILGHVLKFGFEFDLFVHNALISMLLSYGDLEAAYDVFNRGCVRDLVTWNAMITGCVRRGLEIEAIKLYREMEAEKVKPNEITMIGLVSSCSRLHDLNLGREFHCYIEEHKLELTVPLINALMDMYVKCGDLLSAQVLFDNMAQKTIVSWTTMVFGYARFGYLDIARKILYKVPEKSVVLWNAIISGCVQSKHSKEALTLFHEMQINNIEPDKVTMINCLCACSQLGALDVGIWIHHYIERKNLSVDVTLGTALVDMYAKCGNIDKALQVFQELPQRNCLTWTAIICGLAFNGNSCDAIYYFSEMIRVGLMPDEITFLGVLSACCHGGLVEEGRKYFSQMSSKFNIFPKLKHYSCMVDLLGRAGHLEDAEELIQNMPIEADAAVWGALFFACRVHGNVQIGKRAAMKLLEMDPQDSGNYVLLASMYSEAKMWKEARSARKLMKERGVDKLPGCSSIEINGIVHEFVVKDALHPQSEMIYESLISLTKQLELEVTSAVPASRDNLSF* 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g2009 677 Pfam E motif 566 628 IPR046848 -
Ahy2g2009 677 TIGRFAM PPR: pentatricopeptide repeat domain 116 150 IPR002885 -
Ahy2g2009 677 TIGRFAM PPR: pentatricopeptide repeat domain 218 252 IPR002885 -
Ahy2g2009 677 TIGRFAM PPR: pentatricopeptide repeat domain 423 450 IPR002885 -
Ahy2g2009 677 TIGRFAM PPR: pentatricopeptide repeat domain 524 547 IPR002885 -
Ahy2g2009 677 TIGRFAM PPR: pentatricopeptide repeat domain 487 514 IPR002885 -
Ahy2g2009 677 TIGRFAM PPR: pentatricopeptide repeat domain 350 383 IPR002885 -
Ahy2g2009 677 Gene3D Tetratricopeptide repeat domain 171 270 IPR011990 GO:0005515
Ahy2g2009 677 Gene3D Tetratricopeptide repeat domain 48 167 IPR011990 GO:0005515
Ahy2g2009 677 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 418 452 IPR002885 -
Ahy2g2009 677 Gene3D Tetratricopeptide repeat domain 425 657 IPR011990 GO:0005515
Ahy2g2009 677 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 216 250 IPR002885 -
Ahy2g2009 677 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 39 664 - -
Ahy2g2009 677 PANTHER OS10G0400250 PROTEIN 39 664 - -
Ahy2g2009 677 Pfam PPR repeat family 113 162 IPR002885 -
Ahy2g2009 677 Pfam PPR repeat family 216 262 IPR002885 -
Ahy2g2009 677 Pfam PPR repeat family 347 392 IPR002885 -
Ahy2g2009 677 Pfam PPR repeat family 449 497 IPR002885 -
Ahy2g2009 677 Gene3D Tetratricopeptide repeat domain 305 418 IPR011990 GO:0005515
Ahy2g2009 677 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 484 514 IPR002885 -
Ahy2g2009 677 Pfam PPR repeat 523 547 IPR002885 -
Ahy2g2009 677 Pfam PPR repeat 188 211 IPR002885 -
Ahy2g2009 677 Pfam PPR repeat 291 316 IPR002885 -
Ahy2g2009 677 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 348 382 IPR002885 -
Ahy2g2009 677 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 114 149 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g2009 Ahy-Chr2 94835738 94838727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g2009 105 661 Glycoside Hydrolase AT3G49170 30.961 1.26e-88 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g2009 - - adu:110273047 1168.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2325 12 110792344 110795442 Ahy2g2009 2 94835738 94838727 hybridization