Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g2007 ATGGCTTCTCCATCGGCATTTTCGCGCCTTAACCTTCTCCTCCCGAAACCTTCTCTTTTTGCCGCCAATTTCCGCAGAACCCAATTCCATTTCTTCCCCACTCTTTCTTCCCGCACCATCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCCTAACATGCTCTTCTTATTCTAATTCTTCTATGAAAGAGCTCCAAAACCCAACCCCAAAACGCGACAACCACTTTGTCGTTTTGGGCATTGAAACCAGCTGCGACGACACTGCCGCCGCCGTTGTGAGAAGCAACGGTGAAATTCTGAGTCAAGTCGTGTCTTCTCAGGCAGATCTGCTAACGAAATATGGAGGTGTCGCTCCAAAAATGGCAGAAGAAGCTCACTCGCAGGTTATTGACCAGGTTGTGCAAGAAGCTCTTGATAATGCTTACATGACTGAGAAGGATCTTACTGCAGTTGCTGTTACTATTGGTCCTGGTTTAAGTCTTTGCCTTCGTGTTGGAGTGCAGAAGGCTCGACAAATTGCTGGGTCCTTTAAGTTACCAATTATTGGCATACATCACATGGAAGCACATGCTCTAGTAGCCAGGTTAACTGAGAAAGATTTACAGTTTCCATTCATAGCCCTACTAATATCAGGGGGACATAATCTACTCATTCTAGCTCGTGATCTTGGGCAATATGTACAACTTGGAACAACAATAGATGATGCAATTGGTGAAGCATATGACAAGACAGCCAAATGGCTTGGACTTGATTTGAGGAGAAGTGGTGGTCCTGCTATAGAGGAGCTTGCTAAGGAGGGGAATGCCAAATCAGTAAGCTTTTCAGTTCCAATGAAGCAGCACAAAGATTGCAACTTTTCCTATGCTGGTCTAAAAACCCAAGTAAGGTTGGCAATTGAATCCAAAAAGATTGATGCCAACATCCCTATTTCTTCTGCAAGTAAAGAAGATCGATTGGCCCGGGCTGATATTGCTGCTGCTTTTCAGCGAATTGCAGTGTTACATCTTGAGGAAAGGTGTGAACGTGCAATCCAGTGGGCATTGAAGATGGAGCCTTCTATAAGACACCTGATTATCTCTGGTGGTGTTGCATCAAATCATTATGTTCGATCTCGGCTTGATATGGTTGTGAAGAAGAATGGCTTGCAACTTGTATGCCCTCCTCCCCGGCTTTGTACTGACAATGGTGTAATGGTAGCTTGGACTGGCATTGAGCACTTCCGCATGGGAAGATATGACCCTCCTCCACCTGCAGAAGAACCAGAAAACTTTGTGTATGATTTGCGGCCGAGGTGGCCACTAGGGGAAGAATATGCCGAAGGAAGAAGTGACGCACGCTCAATAAGAAGGGCTCGTCTTCATCCATCTCTTACGTCTATAATTCAAGCATCATCACAGCAGTGA 1410 0.4603 MASPSAFSRLNLLLPKPSLFAANFRRTQFHFFPTLSSRTISSSSSSSSSSSSSLTCSSYSNSSMKELQNPTPKRDNHFVVLGIETSCDDTAAAVVRSNGEILSQVVSSQADLLTKYGGVAPKMAEEAHSQVIDQVVQEALDNAYMTEKDLTAVAVTIGPGLSLCLRVGVQKARQIAGSFKLPIIGIHHMEAHALVARLTEKDLQFPFIALLISGGHNLLILARDLGQYVQLGTTIDDAIGEAYDKTAKWLGLDLRRSGGPAIEELAKEGNAKSVSFSVPMKQHKDCNFSYAGLKTQVRLAIESKKIDANIPISSASKEDRLARADIAAAFQRIAVLHLEERCERAIQWALKMEPSIRHLIISGGVASNHYVRSRLDMVVKKNGLQLVCPPPRLCTDNGVMVAWTGIEHFRMGRYDPPPPAEEPENFVYDLRPRWPLGEEYAEGRSDARSIRRARLHPSLTSIIQASSQQ* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g2007 469 Hamap tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 78 436 IPR022450 GO:0002949
Ahy2g2007 469 Pfam tRNA N6-adenosine threonylcarbamoyltransferase 100 403 IPR000905 -
Ahy2g2007 469 Gene3D - 80 411 - -
Ahy2g2007 469 Gene3D - 206 389 - -
Ahy2g2007 469 SUPERFAMILY Actin-like ATPase domain 80 403 IPR043129 -
Ahy2g2007 469 TIGRFAM gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 81 402 IPR017861 -
Ahy2g2007 469 PANTHER TRNA N6-ADENOSINE THREONYLCARBAMOYLTRANSFERASE 75 448 IPR000905 -
Ahy2g2007 469 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 153 173 IPR017861 -
Ahy2g2007 469 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 208 220 IPR017861 -
Ahy2g2007 469 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 174 193 IPR017861 -
Ahy2g2007 469 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 359 368 IPR017861 -
Ahy2g2007 469 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 231 252 IPR017861 -
Ahy2g2007 469 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 81 94 IPR017861 -
Ahy2g2007 469 PANTHER TRNA N6-ADENOSINE THREONYLCARBAMOYLTRANSFERASE, MITOCHONDRIAL-RELATED 75 448 IPR022450 GO:0002949
Ahy2g2007 469 TIGRFAM T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 80 409 IPR022450 GO:0002949
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g2007 Ahy-Chr2 94821772 94828472 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g2007 K01409 - gmx:100784367 726.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2324 12 110782583 110787772 Ahy2g2007 2 94821772 94828472 hybridization