Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2324 ATGGCTTCTCCATCGGCATTTTCGCGCCTTAACCTTCTCCTCCCAAAACCTTCTCTTTTTGCCGCCAATTTCCGCAGAACCCAATTCCAATTCTTCCCCACTCTTTCTTCCCGAACCATCTTCTCCTCCTCCTCCTCCCTAACATGCTCTTCTTATTCTAATTCTTCCATAAAGGAGCTCCAAAACCCAACCCCAAAACGCGACAACCACTTTGTCGTTTTGGGCATTGAAACCAGCTGCGACGATACTGCCGCCGCCGTTGTGAGAAGCAACGGTGAAATTCTGAGTCAAGTGGTGTCTTCTCAGGCAGATCTGCTAGCGAAATATGGAGGTGTCGCTCCAAAAATGGCAGAAGAGGCTCACTCGCAGGTTATTGACCAGGTTGTGCAAGAAGCTCTTGATAAAGCTTACATGACTGAGAAGGATCTTACTGCAGTTGCTGTTACTATTGGTCCTGGTTTAAGTCTTTGCCTTCGTGTTGGAGTGCAGAAGGCTCGACAAATTGCTGGGTCCTTTAAGTTACCAATTATTGGCATACATCACATGGAAGCACATGCTCTAGTAGCCAGGTTAACCGAGAAAGATTTACAGTTTCCTTTCATAGCCCTACTAATATCAGGGGGACATAATCTACTCATTCTAGCTCGTGATCTTGGGCAATATGTACAACTTGGAACAACAATAGATGATGCAATTGGTGAAGCATATGACAAGACAGCCAAATGGCTTGGACTTGATTTGAGGAGAAGTGGTGGTCCTGCTATAGAGGAGCTTGCTAAGGAGGGGAATGCCAAATCAGTAAACTTTTCAGTTCCAATGAAGCAGCACAAAGATTGCAACTTCTCCTATGCTGGTCTAAAAACCCAAGTAAGGTTGGCAATCGAATCCAAAAAGATTGATGCCAAGATCCCTATTTCTTCTGCAAGTAAAGAAGATCGATTGGCCCGGGCTGATATTGCTGCTGCTTTTCAGCGAATTGCAGTGTTACATCTTGAGGAAAGGTGTGAACGTGCGATCCAGTGGGGATTGAAGATGGAGCCTTCTATAAGACACCTGATTATCTCTGGTGGCGTTGCATCAAATTATTATGTTCGATCTCGGCTTGATATGGTTGTGAAGAAGAATGGCTTGCAACTTGTATGCCCTCCTCCCCGGCTTTGTACTGACAATGGTGTAATGGTAGCTTGGACTGGCATTGAGCACTTCCGCATGGGAAGATATGACCCTCCTCCACCTGCAGAAGAACCTGAAAACTTTGTGTATGATTTGCGGCCGAGGTGGCCGCTGGGGGAAGAATATGCCGAAGGAAGAAGTGATGCACGCTCAATAAGAAGGGCTCGCCTTCATCCATCTCTTACGTCCATAATTCAAGCATCATCACAGCAGTGA 1389 0.4608 MASPSAFSRLNLLLPKPSLFAANFRRTQFQFFPTLSSRTIFSSSSSLTCSSYSNSSIKELQNPTPKRDNHFVVLGIETSCDDTAAAVVRSNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSQVIDQVVQEALDKAYMTEKDLTAVAVTIGPGLSLCLRVGVQKARQIAGSFKLPIIGIHHMEAHALVARLTEKDLQFPFIALLISGGHNLLILARDLGQYVQLGTTIDDAIGEAYDKTAKWLGLDLRRSGGPAIEELAKEGNAKSVNFSVPMKQHKDCNFSYAGLKTQVRLAIESKKIDAKIPISSASKEDRLARADIAAAFQRIAVLHLEERCERAIQWGLKMEPSIRHLIISGGVASNYYVRSRLDMVVKKNGLQLVCPPPRLCTDNGVMVAWTGIEHFRMGRYDPPPPAEEPENFVYDLRPRWPLGEEYAEGRSDARSIRRARLHPSLTSIIQASSQQ* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2324 462 Hamap tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 71 429 IPR022450 GO:0002949
Ahy12g2324 462 Gene3D - 73 404 - -
Ahy12g2324 462 PANTHER TRNA N6-ADENOSINE THREONYLCARBAMOYLTRANSFERASE, MITOCHONDRIAL-RELATED 69 441 IPR022450 GO:0002949
Ahy12g2324 462 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 224 245 IPR017861 -
Ahy12g2324 462 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 74 87 IPR017861 -
Ahy12g2324 462 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 146 166 IPR017861 -
Ahy12g2324 462 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 352 361 IPR017861 -
Ahy12g2324 462 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 201 213 IPR017861 -
Ahy12g2324 462 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 167 186 IPR017861 -
Ahy12g2324 462 Pfam tRNA N6-adenosine threonylcarbamoyltransferase 93 396 IPR000905 -
Ahy12g2324 462 TIGRFAM gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 74 395 IPR017861 -
Ahy12g2324 462 PANTHER TRNA N6-ADENOSINE THREONYLCARBAMOYLTRANSFERASE 69 441 IPR000905 -
Ahy12g2324 462 TIGRFAM T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 73 402 IPR022450 GO:0002949
Ahy12g2324 462 Gene3D - 199 382 - -
Ahy12g2324 462 SUPERFAMILY Actin-like ATPase domain 73 396 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2324 Ahy-Chr12 110782583 110787772 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2324 K01409 - gmx:100784367 733.021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2324 12 110782583 110787772 Ahy2g2007 2 94821772 94828472 hybridization