Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1959 ATGTCAAGACGCGATGTACCTGATTCTGATCCAGATGACGATGCCTCAGCTTCAAGCTCCGGCGAGGAAGAGGAAGAGGCGGAAGAAACCACCGTTGCCGAGACCGCAAAGACGGTTTCGGAGTACGAGAAGCAGAGGCTATCGAGAATAGCGGAGAATAACGCAAAGCTGGAGGCACTAGGTCTGCATAAAATGGCGTCTTCCTTGTTGAACAGAAAAGGGAAAGAGAAGCTCAAAGAAGAAGAAGAAGAATTAGATGATCATGATGATGATGATGATGAGTATATCCCCGACGATGATGCAGAAGAACCAGTATCAGATTCTTCGGACGATAAAGATGAAGAATTTGTGATCGGAAATGCTTCTGGATCGCGCAAAAGGAAGGTGAAGGACAAAGGTTTAAAAATGAAAGCTAAAGTGTCTGGGAAGAAGCATTGTAATAGGAATTCAGAGTACATTGATGGTGATGATGAAGATGAAGCTTTGAGGCTGGCAATTGCTCTTTCTCTGCAAGACAGTGGTGTAGAAGATTCCTCTTCCAAACATGTAGTGAAGAACATTACCAAGTCTGAGAAAAAGAGGAATATTCAAAATCAAGAAGATAAAGAAAGAAAGAAGAACAAGAAATTGTTTGCTAGTAGACTGCAAATGACTGAAGATGAACTCATTGTACACTTCTTCCAGCTTGATGAAGCAGGAAAAGGAACTGTATCAATGAGAGATCTACAAAGAGCGGCCATAGCTCATGATTTCTCTTGGACTGACAAAGAATTGGTCGATATGATTCGTTGCTTTGATAGTGATGGAGATGGAAGGATAAGCCTTGACGATTTCCGGAAGATTGCTGTTCGATGCAACTTGATTAGAGAGACTTAA 876 0.4201 MSRRDVPDSDPDDDASASSSGEEEEEAEETTVAETAKTVSEYEKQRLSRIAENNAKLEALGLHKMASSLLNRKGKEKLKEEEEELDDHDDDDDEYIPDDDAEEPVSDSSDDKDEEFVIGNASGSRKRKVKDKGLKMKAKVSGKKHCNRNSEYIDGDDEDEALRLAIALSLQDSGVEDSSSKHVVKNITKSEKKRNIQNQEDKERKKNKKLFASRLQMTEDELIVHFFQLDEAGKGTVSMRDLQRAAIAHDFSWTDKELVDMIRCFDSDGDGRISLDDFRKIAVRCNLIRET* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1959 291 MobiDBLite consensus disorder prediction 1 40 - -
Ahy2g1959 291 MobiDBLite consensus disorder prediction 177 206 - -
Ahy2g1959 291 Pfam EF-hand domain pair 221 281 IPR002048 GO:0005509
Ahy2g1959 291 SMART efh_1 257 285 IPR002048 GO:0005509
Ahy2g1959 291 Gene3D - 214 286 - -
Ahy2g1959 291 ProSitePatterns EF-hand calcium-binding domain. 266 278 IPR018247 -
Ahy2g1959 291 Gene3D - 149 207 - -
Ahy2g1959 291 MobiDBLite consensus disorder prediction 111 127 - -
Ahy2g1959 291 Coils Coil 71 91 - -
Ahy2g1959 291 MobiDBLite consensus disorder prediction 178 206 - -
Ahy2g1959 291 MobiDBLite consensus disorder prediction 128 143 - -
Ahy2g1959 291 MobiDBLite consensus disorder prediction 15 30 - -
Ahy2g1959 291 SUPERFAMILY EF-hand 215 287 IPR011992 -
Ahy2g1959 291 Coils Coil 189 209 - -
Ahy2g1959 291 MobiDBLite consensus disorder prediction 61 153 - -
Ahy2g1959 291 ProSiteProfiles EF-hand calcium-binding domain profile. 253 288 IPR002048 GO:0005509
Ahy2g1959 291 MobiDBLite consensus disorder prediction 83 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1959 Ahy-Chr2 93986395 93989146 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g1959 35 289 EF-hand Containing Proteins AT1G73440 40.000 4.78e-45 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1959 - - var:108347013 296.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2271 12 109707986 109710455 Ahy2g1959 2 93986395 93989146 hybridization