Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2271 ATGTCAAGACGCGATGTACCTGATTCTGATCCAGATGACGATGGCTCAGCTTCAAGCTCCGGCGAGGAAGAGGAAGAGGCGGAAGAAACCACCGTTGCCGCGACCGCAAAGACGGTTTCGGAGTACGAGAAGCAGAGGCTATCGAGAATAGCGGAGAATAACGCAAAGCTGGAGGCACTAGGTCTGCATAAAATGGCGGCTTCCTTGTTGAAAAGAAAAGGGAAAGAGAAGCTCAAAGAAGAAGAACTAGATGATCATGATGATGATGATGATGAGTATATCCCCGATGATGATGCAGAAGAACCAGTATCAGATTCTTCGGACGATAAAGATGAAGAATTTGTGATCGGAAATGCTTCTGGATCGCGCAAAAGGAAGGTGAAGGACAAAGGTTTAAAAATGAAAGCTAAAGTGTCTGGGAAGAAGCATTGTAATAGGAATTCAGAGTACGTTGATGGTGATGATGAAGATGAAGCTTTGAGGCAGGCAATTGCTCTTTCCCTGCAAGACAGTGGTGTAGAAGATTCCTCTTTCAAACATGTAGTGAAGAACATTACTAAGTCTGAGAAAAAGAGGAATATTCAAAATCAAGAGGATAAAGAAAGAAAGAAGAACAAGAAATCGTTTGCTAGTAGACTGCAAATGACTGAAGATGAACTCATTGTACACTTCTTCCAGCTTGATGAAGCAGGAAAAGGAACTGTATCAATGAGAGATCTACAAAGAGCAGCCATAGCTCATGATTTCTCTTGGACTGACAAAGAATTGGTCGATATGATTCGTTGCTTTGATAGTGATGGAGATGGAAGGATAACCCTTGACGATTTCCGGAAGATTGCTGTTCGATGCAACTTGATTAGAGAGTCTTAA 870 0.423 MSRRDVPDSDPDDDGSASSSGEEEEEAEETTVAATAKTVSEYEKQRLSRIAENNAKLEALGLHKMAASLLKRKGKEKLKEEELDDHDDDDDEYIPDDDAEEPVSDSSDDKDEEFVIGNASGSRKRKVKDKGLKMKAKVSGKKHCNRNSEYVDGDDEDEALRQAIALSLQDSGVEDSSFKHVVKNITKSEKKRNIQNQEDKERKKNKKSFASRLQMTEDELIVHFFQLDEAGKGTVSMRDLQRAAIAHDFSWTDKELVDMIRCFDSDGDGRITLDDFRKIAVRCNLIRES* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2271 289 MobiDBLite consensus disorder prediction 190 209 - -
Ahy12g2271 289 ProSitePatterns EF-hand calcium-binding domain. 264 276 IPR018247 -
Ahy12g2271 289 MobiDBLite consensus disorder prediction 83 108 - -
Ahy12g2271 289 MobiDBLite consensus disorder prediction 126 141 - -
Ahy12g2271 289 Gene3D - 211 284 - -
Ahy12g2271 289 SMART efh_1 255 283 IPR002048 GO:0005509
Ahy12g2271 289 Coils Coil 187 207 - -
Ahy12g2271 289 SUPERFAMILY EF-hand 209 284 IPR011992 -
Ahy12g2271 289 MobiDBLite consensus disorder prediction 15 29 - -
Ahy12g2271 289 ProSiteProfiles EF-hand calcium-binding domain profile. 251 286 IPR002048 GO:0005509
Ahy12g2271 289 Pfam EF-hand domain pair 219 279 IPR002048 GO:0005509
Ahy12g2271 289 MobiDBLite consensus disorder prediction 73 153 - -
Ahy12g2271 289 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 155 172 IPR003903 -
Ahy12g2271 289 MobiDBLite consensus disorder prediction 1 39 - -
Ahy12g2271 289 Gene3D - 147 205 - -
Ahy12g2271 289 MobiDBLite consensus disorder prediction 109 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2271 Ahy-Chr12 109707986 109710455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2271 35 289 EF-hand Containing Proteins AT1G73440 40.927 6.78e-46 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2271 - - var:108347013 300.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2271 12 109707986 109710455 Ahy2g1959 2 93986395 93989146 hybridization