Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1905 ATGGCCAGCATTAGGGTTACATGCGTTGTTCTTATGGTGTGCATGGCATTGTTGAGTGCACCGTTGGTCCACGGCGCCATGTCGTGTGGCACCGTGACCGTTTCCTTGACATCTTGCCTCGGATACCTGCAGCGCGGGGGAGTCCCGACACCGACATGTTGCCAAGGGGTCAAGAATATCCTTGCCAGTGCCAGGACTCCCGCCGACCGCAGGACCGTGTGCACTTGCCTTAAATCATCGGCCGGTCAAGTTCCCGGCCTTAATCTTGCCAATGCTGGCTCACTCCCTTCCAAATGTGGTGTTAACATCCCATACAAGATTAGCCCCTCCACAAACTGCAATACCATCAATTCAATTCTCAAGTGTTTCACATGTGATGGAGAAGAATGA 390 0.5282 MASIRVTCVVLMVCMALLSAPLVHGAMSCGTVTVSLTSCLGYLQRGGVPTPTCCQGVKNILASARTPADRRTVCTCLKSSAGQVPGLNLANAGSLPSKCGVNIPYKISPSTNCNTINSILKCFTCDGEE* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1905 129 PANTHER - 1 115 IPR000528 GO:0006869|GO:0008289
Ahy2g1905 129 PRINTS Plant phospholipid transfer protein signature 86 103 IPR000528 GO:0006869|GO:0008289
Ahy2g1905 129 PRINTS Plant phospholipid transfer protein signature 28 44 IPR000528 GO:0006869|GO:0008289
Ahy2g1905 129 PRINTS Plant phospholipid transfer protein signature 48 62 IPR000528 GO:0006869|GO:0008289
Ahy2g1905 129 PRINTS Plant phospholipid transfer protein signature 69 84 IPR000528 GO:0006869|GO:0008289
Ahy2g1905 129 PRINTS Plant phospholipid transfer protein signature 104 115 IPR000528 GO:0006869|GO:0008289
Ahy2g1905 129 Pfam Protease inhibitor/seed storage/LTP family 29 113 IPR016140 -
Ahy2g1905 129 SMART aai_6 29 113 IPR016140 -
Ahy2g1905 129 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 29 - -
Ahy2g1905 129 ProSitePatterns Plant lipid transfer proteins signature. 95 116 IPR000528 GO:0006869|GO:0008289
Ahy2g1905 129 Gene3D - 26 117 IPR036312 -
Ahy2g1905 129 CDD nsLTP1 28 114 - -
Ahy2g1905 129 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 28 116 IPR036312 -
Ahy2g1905 129 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 1 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1905 Ahy-Chr2 92854590 92856230 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g1905 6 117 Acyl Lipid Metabolism Gene Families AT5G59320 49.107 8.52e-29 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1905 - - gmx:100306510 147.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2193 12 107999193 108000310 Ahy2g1905 2 92854590 92856230 hybridization