Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2193 ATGGCTAAGCTAGCACCATGTGTGGTTCTCATGTTGTGCATGGCTATAGTGGGTGCACCCATCGCCAAAGCTGCCATCCAATGTTCCTTTGTCACAAAGAGTATAGCTCCATGCTTTGGTTACCTCAAAAGCGGAGGAACTGTTTCCGGACCATGTTGTAGTGGCATCCAGAACATCAATGGCACTGCCAAGACCACCTCTGACCGTCAAGCAGTTTGTAACTGCTTGAAATCGGCCGCGGCTAGTCTTGGCAGCCAAATTAACCCTAACAATGCTGCCTCTCTCCCTGGCAAATGTGGTGTTAGCATTCCCTATAAGATTAGCACCTCTATCAACTGTTCTAGCATCAAGTGA 354 0.4831 MAKLAPCVVLMLCMAIVGAPIAKAAIQCSFVTKSIAPCFGYLKSGGTVSGPCCSGIQNINGTAKTTSDRQAVCNCLKSAAASLGSQINPNNAASLPGKCGVSIPYKISTSINCSSIK* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2193 117 PANTHER - 3 115 IPR000528 GO:0006869|GO:0008289
Ahy12g2193 117 SMART aai_6 28 113 IPR016140 -
Ahy12g2193 117 CDD nsLTP1 26 114 - -
Ahy12g2193 117 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 26 116 IPR036312 -
Ahy12g2193 117 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 3 115 - -
Ahy12g2193 117 ProSitePatterns Plant lipid transfer proteins signature. 95 116 IPR000528 GO:0006869|GO:0008289
Ahy12g2193 117 PRINTS Plant phospholipid transfer protein signature 86 103 IPR000528 GO:0006869|GO:0008289
Ahy12g2193 117 PRINTS Plant phospholipid transfer protein signature 27 43 IPR000528 GO:0006869|GO:0008289
Ahy12g2193 117 PRINTS Plant phospholipid transfer protein signature 104 115 IPR000528 GO:0006869|GO:0008289
Ahy12g2193 117 PRINTS Plant phospholipid transfer protein signature 68 83 IPR000528 GO:0006869|GO:0008289
Ahy12g2193 117 PRINTS Plant phospholipid transfer protein signature 47 61 IPR000528 GO:0006869|GO:0008289
Ahy12g2193 117 Gene3D - 25 117 IPR036312 -
Ahy12g2193 117 Pfam Protease inhibitor/seed storage/LTP family 28 111 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2193 Ahy-Chr12 107999193 108000310 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2193 9 117 Acyl Lipid Metabolism Gene Families AT2G38540 47.706 6.41e-33 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2193 - - gmx:100817318 143.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2193 12 107999193 108000310 Ahy2g1905 2 92854590 92856230 hybridization