Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1899 ATGGCGATGATTCTTGCGAGGAAGCTGTTGCAACGGCGATCGCCGCAGCTGCTTCGTTGGCAGAGTAGCTTCCCTCAGGCAGCGGTCAAAAACGACGTTGCATCCAGAGCCGCCGTCGAATTGGAGCTTCCACCGTTTGACTACGCTCCTCCGCCGTACTCCGGTCCTTCTGGTGACGAAATACTGGCGAAGCGGAGGGAGTATCTGAGCCCTTCACTGTTTCATTTTTACAAGAATCCCCTGAATGTGGTGGAAGGGAAGAAGCAATACTTGTTCGACGAGAAGGGAAAGAGGTACTTGGATGCATTCGGGGGAATTGCTACGGTGTGCTGCGGGCACTGCCACCCAGATGTGGTCGACGCCATCATCAACCAAACCAAACGGTTGCAACACTCTACTGTGCTCTACCTTAACCACGCCATCGCCGATTTTGCCCAAGCTCTCGCTTCCAAACTCCCCGGTAACCTTAAGAGTGGTGTTCATCATGTAGTGAATCCAGATCCATACAGAGGTATCTTTGGTTCTGACGGAGAAAAATATGCAAGAGATGTCCAAGATGTCATTAACTTTGGAACTTCTGGAAATGTTGCAGCGTTCATATCTGAAGCAATACAGGGAGTTGGGGGTATTGTGGAATTGGCTCCTGGTTACTTGCCTGCTGCTTACAGTATGGTTAAGAAAGCTGGAGGGCTTTGTATTGCCGATGAAGTTCAGGCCGGCTTTGCTCGCATCGGCAGCCATTTCTGGGGATTTGAGTCTCATGGTGTTGTTCCTGACATAGTCACAATGGCCAAGGGCATTGGAAATGGCATTCCCCTTGGTGCTGTTGTAACTACTCCAGAGATCGCCGAGGTCTTGACGCGCCGATGTTACTTCAACACCTTTGGTGGGAACCCTGTATGTACTGCTGCAGGGTTGGCAGTTCTGAAAGTAATAGAGAAAGAGAAGCTTCAACAAAATGCTCTTCTTGTTGGATCTTACTTGAAGGAGAGGTTAACTGCACTCAAAGATAAATATGAATTGATTGGTGATGTGAGAGGAAGAGGTCTCATGCTAGGAGTTGAACTTGTCGCCGATCGAGAACTTAAAACTCCTGCAAAAGCCGAAACACTACATGTAATGGACCAAATGAAAGAATTAGGAGTGCTAATTGGAAAGGGTGGTTACTATGGAAATGTCTTCAGAATCACACCACCTCTCTGTTTCACCAAAGAAGATGCAGACTTCCTCGCAGACGCAATGGACTTGACCCTGTCTAGAATGTAA 1266 0.4826 MAMILARKLLQRRSPQLLRWQSSFPQAAVKNDVASRAAVELELPPFDYAPPPYSGPSGDEILAKRREYLSPSLFHFYKNPLNVVEGKKQYLFDEKGKRYLDAFGGIATVCCGHCHPDVVDAIINQTKRLQHSTVLYLNHAIADFAQALASKLPGNLKSGVHHVVNPDPYRGIFGSDGEKYARDVQDVINFGTSGNVAAFISEAIQGVGGIVELAPGYLPAAYSMVKKAGGLCIADEVQAGFARIGSHFWGFESHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAEVLTRRCYFNTFGGNPVCTAAGLAVLKVIEKEKLQQNALLVGSYLKERLTALKDKYELIGDVRGRGLMLGVELVADRELKTPAKAETLHVMDQMKELGVLIGKGGYYGNVFRITPPLCFTKEDADFLADAMDLTLSRM* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1899 421 PANTHER - 21 157 - -
Ahy2g1899 421 PANTHER - 157 421 - -
Ahy2g1899 421 SUPERFAMILY PLP-dependent transferases 59 419 IPR015424 -
Ahy2g1899 421 CDD OAT_like 65 415 IPR005814 GO:0008483|GO:0030170
Ahy2g1899 421 Gene3D Aspartate Aminotransferase, domain 1 277 421 IPR015422 GO:0003824
Ahy2g1899 421 Gene3D Aspartate Aminotransferase, domain 1 60 205 IPR015422 GO:0003824
Ahy2g1899 421 ProSitePatterns Aminotransferases class-III pyridoxal-phosphate attachment site. 232 270 IPR005814 GO:0008483|GO:0030170
Ahy2g1899 421 PANTHER ALANINE--GLYOXYLATE AMINOTRANSFERASE 2 HOMOLOG 3, MITOCHONDRIAL-LIKE ISOFORM X1 21 157 - -
Ahy2g1899 421 PANTHER ALANINE--GLYOXYLATE AMINOTRANSFERASE 2 HOMOLOG 3, MITOCHONDRIAL-LIKE ISOFORM X1 157 421 - -
Ahy2g1899 421 Pfam Aminotransferase class-III 159 415 IPR005814 GO:0008483|GO:0030170
Ahy2g1899 421 Pfam Aminotransferase class-III 80 154 IPR005814 GO:0008483|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1899 Ahy-Chr2 92740050 92746619 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1899 K00827 - gmx:100170733 666.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2181 12 107786939 107787481 Ahy2g1899 2 92740050 92746619 hybridization