Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2181 ATGGAAGATATGTTATATAGCAAGGACTTGTATGATCCTATGGAAGGGGATAAATCCAAAGGTACCAAATCCGATACTGAATGGAAGAAGCTGAATCGGAAGGCAGTTGCTTTAATTAGGCAATGGCTTGATCTTAGCGTGTATCCACATGTTGACACCGAAACGAATACCGAGAAGATGTGGAATGAATTGAAGGAGTTATATGAGAGGAAGAACGTGCAAAATATAGCATTCTTGATTAGGATGCTTGTTAATATGAAGTATATTGAAGGTAAATCAATGCCGGAGCACTTGAGCACCTTTCAAGAGACGGTGAACCAACTAACAAATAATGAAATCACTTTGAATAATGAGTTACAAGTCTTGTTGTTATTGAGCTCTTTGCTTGATAGTTGGAAAGTTCTGGTTGTGACACTGACTAACTCAGCTCCAAAAAGAAAGTTGACATTAGCAATGGTTAAAGAGAGCATGTTGAATGAAGAAGTCAGAAGAAGAGAGCGAGGTTTGATTAATGCCTCCTCCCAGTCAGAAGCACTTGTTTGA 543 0.3867 MEDMLYSKDLYDPMEGDKSKGTKSDTEWKKLNRKAVALIRQWLDLSVYPHVDTETNTEKMWNELKELYERKNVQNIAFLIRMLVNMKYIEGKSMPEHLSTFQETVNQLTNNEITLNNELQVLLLLSSLLDSWKVLVVTLTNSAPKRKLTLAMVKESMLNEEVRRRERGLINASSQSEALV* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2181 180 PANTHER ZINC FINGER, CCHC-TYPE, TUBBY C-TERMINAL-LIKE DOMAIN PROTEIN-RELATED 2 166 - -
Ahy12g2181 180 PANTHER - 2 166 - -
Ahy12g2181 180 Pfam gag-polypeptide of LTR copia-type 28 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2181 Ahy-Chr12 107786939 107787481 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2181 - - aip:107611236 273.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2181 12 107786939 107787481 Ahy2g1899 2 92740050 92746619 hybridization