Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0688 ATGGAAGCAACCATCTCAACTACCTCCACAGCCTCATCAATCACCCGCACTAGCTTTGTACAAAACAGACCTCTTGGGAACTCATCCTCTTCTATTCTTGTGTCAAAGTTGGGAGGAAGAATAAGGTGCTCAATGGAAGGAAAGCCTTCTATTGAGGAAGAAAGTAAGTCAAAGATGGGAATGGGAGCCTCATCATCCATGTTAGGTGTCGCCATTGCTACAACCATGTCAAGCCCAGCAGCCATTGCTTTGGTTGATGAGAGAATGAGCACTGAGGGAACTGGGCTTCCATTTGGGCTTAGCAACAATATTCTTGGGTGGATCCTTTTTGGTGTATTTGCTCTTATTTGGTCTCTCTACCATTTTAAATTAACGTTACACATTCTAGTACTGGCCCAAATTTTATAA 408 0.4314 MEATISTTSTASSITRTSFVQNRPLGNSSSSILVSKLGGRIRCSMEGKPSIEEESKSKMGMGASSSMLGVAIATTMSSPAAIALVDERMSTEGTGLPFGLSNNILGWILFGVFALIWSLYHFKLTLHILVLAQIL* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0688 135 PANTHER PHOTOSYSTEM II REACTION CENTER W 3 121 - -
Ahy2g0688 135 PANTHER PHOTOSYSTEM II REACTION CENTER W PROTEIN, CHLOROPLASTIC 3 121 IPR009806 GO:0009507|GO:0009523|GO:0015979
Ahy2g0688 135 Pfam Photosystem II reaction centre W protein (PsbW) 3 121 IPR009806 GO:0009507|GO:0009523|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0688 Ahy-Chr2 11401516 11402731 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0688 K02721 - jre:108984854 139.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0149 16 1552429 1553205 Ahy2g0688 2 11401516 11402731 PCT
Ahy6g1182 6 17353195 17354094 Ahy2g0688 2 11401516 11402731 PCT
Ahy2g0688 2 11401516 11402731 Ahy16g0149 16 1552429 1553205 PCT
Ahy2g0688 2 11401516 11402731 Ahy6g1182 6 17353195 17354094 PCT