Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0411 ATGGGTGCGAAAAGGAAGAAGAGGAGCAAGGGTTCCGATAGTGACGAAGATGATGAGAGAGATTCACCGCCACCAAAGAAGCAAGGAGCTTCTGCTTCCTCCGATTCCAATTCGATTAAGCAGAAATCGAAGAAGAAGGAGATACTTCCTTCGATGATAAAGAACAAGGAGAAGAGATCTGAGATCCATGCCAAGCTCAAACGCCAGAAGAAGCTTGAGAAGCGCAACAAGCTCAAGGAACGCCAAGCCGCTGAGAAAAGAGCTCTTGAGCTCGGCGAAGAGCCTCCAGAGAAGAAGGTTCCACGCACCATCGAGAACACCAGGGAATTCGACGAAACTGTTTGCATGCCCGACGATGAAGAGTTATTTGCTGGAAATGATGCTGATGAGTTCAGCAAAATTTTGAGCCAGCAACAAACCCCAAAGATATTAATCACCACATGCCGTTTCAATTCTTCGAGGGGACCTGCTTTTATATCAGAATTGCTTTCTGTTATACCAAATGCACATTACTTCAAGAGAGGAACCTATGATTTAAAAAAGATTGTAGAATATGCGAAGAAAAAGGACTTCACTTCTATGGTGGTTGTTCACACCAATCGCCGTGAGCCAGATGCTCTCTTAATCATTGGATTGCCTGATGGACCTACTGCTCACTTCAAGCTTTCAAAGCTTGTTTTGCGCAAGGATATAAAGAATCATGGAAATCCAACCAGTCACAAGCCTGAGCTTGTGTTCAATAACTTCACAACGCGTTTGGGGCATCGAGTTGCAAGATTGATACAGTCACTTTTCCCACAAGAACCAGAATTTAAAGGCCGACGAGTGGTTACGTTCCACAATCAGAGAGACTTCATATTCTTCCGACATCATCGGTATATCTTTGAAACCAAAGAAATTAAAAAGACTGATACTAAAGGTAAAAAGGACGAAAAGGGGACAAATGAGAAAGTTCCTGATCACAAAACAATAGCTCGTCTTCAGGAATGTGGCCCTCGTTTCACATTGAAATTGATCAGCCTGCAGCATGGAACATTTGACTCCAAGGGAGGAGAATATGAGTGGGTTCATAAGCCGGAAATGGATACAAGTCGGAGGAGGTTTTTCCTATAG 1113 0.4358 MGAKRKKRSKGSDSDEDDERDSPPPKKQGASASSDSNSIKQKSKKKEILPSMIKNKEKRSEIHAKLKRQKKLEKRNKLKERQAAEKRALELGEEPPEKKVPRTIENTREFDETVCMPDDEELFAGNDADEFSKILSQQQTPKILITTCRFNSSRGPAFISELLSVIPNAHYFKRGTYDLKKIVEYAKKKDFTSMVVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTSHKPELVFNNFTTRLGHRVARLIQSLFPQEPEFKGRRVVTFHNQRDFIFFRHHRYIFETKEIKKTDTKGKKDEKGTNEKVPDHKTIARLQECGPRFTLKLISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0411 370 SMART Brix_2 144 341 IPR007109 GO:0006364|GO:0019843
Ahy2g0411 370 MobiDBLite consensus disorder prediction 1 99 - -
Ahy2g0411 370 MobiDBLite consensus disorder prediction 39 62 - -
Ahy2g0411 370 MobiDBLite consensus disorder prediction 1 25 - -
Ahy2g0411 370 ProSiteProfiles Brix domain profile. 141 347 IPR007109 GO:0006364|GO:0019843
Ahy2g0411 370 Gene3D - 141 337 - -
Ahy2g0411 370 Coils Coil 55 94 - -
Ahy2g0411 370 PANTHER U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4 41 370 IPR044281 GO:0006364|GO:0042134
Ahy2g0411 370 MobiDBLite consensus disorder prediction 76 99 - -
Ahy2g0411 370 Pfam Brix domain 152 339 IPR007109 GO:0006364|GO:0019843
Ahy2g0411 370 PANTHER RIBOSOME PRODUCTION FACTOR 1 41 370 - -
Ahy2g0411 370 SUPERFAMILY Class II aaRS ABD-related 141 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0411 Ahy-Chr2 5710303 5714254 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0411 K14846 - gmx:100785331 573.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0458 12 7171167 7175135 Ahy2g0411 2 5710303 5714254 hybridization