Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0458 ATGGGTGCGAAAAGGAAGAAGAGGAGCAAGGGTTCCGATAGTGACGAAGATGATGAGAGAGATTCACCGCCACCAAAGAAGCAAGGAGCTTCTGCTTCCTCCGATTCCAATTCGATTAAGCAGAAATCGAAGAAGGAGATACTTCCTTCGATGATAAAGAACAAGGAGAAGAGATCTGAGATCCATGCCAAGATCAAGCGCCAGAAGAAGCTTGAGAAGCGCAACAAGCTCAAGGAACGCCAAGCCGCTGAGAAAAGAGCTCTTGAGCTCGGCGAAGAGCCTCCAGAGAAGAAGGTTCCACGCACCATCGAGAACACCAGGGAATTCGACGAGACTGTTTGCATGCCCGACGATGAAGAGTTATTTGCAGGAAATGATGCTGATGAGTTCAGTAAAATTTTGAGCCAGCAACAAACTCCAAAGATATTAATCACCACTTGCCGTTTCAATTCTTCGAGGGGACCTGCTTTTATATCAGAATTGCTTTCTGTTATACCAAATGCACATTACTTCAAGAGAGGAACCTATGATTTAAAAAAGATTGTAGAATATGCAAAGAAAAAGGACTTCACTTCTATGATAGTTGTTCACACCAATCGCCGGGAGCCAGATGCTCTCTTAATCATTGGATTGCCTGATGGACCTACTGCTCACTTCAAGCTTTCAAAGCTTGTTTTGCGCAAGGATATAAAGAATCATGGAAATCCAACCAGTCACAAGCCTGAGCTTGTGTTCAATAACTTCACAACGCGTTTGGGGCATCGAGTTGCAAGATTGATACAGTCACTTTTCCCACAAGAACCAGAATTTAAAGGCCGACGAGTGGTTACGTTCCACAATCAGAGAGACTTCATATTCTTCCGACATCATCGGTATATCTTTGAAACCAAAGAAATTAAAAAGACTGATACTAAAGGTAAAAAGGACGAAAAGGGGACAAATGAGAAAGTTCCTGATCACAAAACAATAGCTCGTCTTCAGGAATGTGGCCCTCGTTTCACATTGAAATTGATCAGCCTGCAGCATGGAACATTTGACTCCAAGGGAGGAGAATATGAGTGGGTTCATAAGTTTTCTATCTGTCCTTGTTCTTCTTTTACCTCACTTTTAGCCGGAAATGGATACAAGTCGGAGGAGGTTTTTCCTATAGTTCATGGAGAGTTGCATTTTGGAAGTTATTTCTTTTGGAGTAGGTTTTATCTGACAAAGATGGTTGTTGCTTATCTTGAAGTTGTGGCAATCTGTCAGCATGGTTTTTCATGTATTTCCCCCCTTGCTTTTGGGGTCTAA 1290 0.4248 MGAKRKKRSKGSDSDEDDERDSPPPKKQGASASSDSNSIKQKSKKEILPSMIKNKEKRSEIHAKIKRQKKLEKRNKLKERQAAEKRALELGEEPPEKKVPRTIENTREFDETVCMPDDEELFAGNDADEFSKILSQQQTPKILITTCRFNSSRGPAFISELLSVIPNAHYFKRGTYDLKKIVEYAKKKDFTSMIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTSHKPELVFNNFTTRLGHRVARLIQSLFPQEPEFKGRRVVTFHNQRDFIFFRHHRYIFETKEIKKTDTKGKKDEKGTNEKVPDHKTIARLQECGPRFTLKLISLQHGTFDSKGGEYEWVHKFSICPCSSFTSLLAGNGYKSEEVFPIVHGELHFGSYFFWSRFYLTKMVVAYLEVVAICQHGFSCISPLAFGV* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0458 429 Pfam Brix domain 151 338 IPR007109 GO:0006364|GO:0019843
Ahy12g0458 429 MobiDBLite consensus disorder prediction 1 25 - -
Ahy12g0458 429 MobiDBLite consensus disorder prediction 75 98 - -
Ahy12g0458 429 PANTHER RIBOSOME PRODUCTION FACTOR 1 41 357 - -
Ahy12g0458 429 Coils Coil 66 93 - -
Ahy12g0458 429 SUPERFAMILY Class II aaRS ABD-related 140 343 - -
Ahy12g0458 429 SMART Brix_2 143 340 IPR007109 GO:0006364|GO:0019843
Ahy12g0458 429 Gene3D - 140 336 - -
Ahy12g0458 429 PANTHER U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4 41 357 IPR044281 GO:0006364|GO:0042134
Ahy12g0458 429 ProSiteProfiles Brix domain profile. 140 346 IPR007109 GO:0006364|GO:0019843
Ahy12g0458 429 MobiDBLite consensus disorder prediction 39 61 - -
Ahy12g0458 429 MobiDBLite consensus disorder prediction 1 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0458 Ahy-Chr12 7171167 7175135 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0458 K14846 - gmx:100785331 547.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0458 12 7171167 7175135 Ahy2g0411 2 5710303 5714254 hybridization