Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0121 ATGGTGTTACAGTTTCTGAAGCATCCTTTCACCATCTCTCGAGGTTTCCACAGTGACACAACCTTAACTATCCTTTCGCGTTTCCCAACTTTCAATTCTCCAGTTAGATGTGTCAGCGCTCAAATTCCAACTCCATTTAAGGGATATGCTACTGCGAATTCAGAAAAGGTTTTACCTGTGAAGAAGAAAAAGAGGCTTGATGAAATATGTCTTGAAAAATATCAGCAATATAGCAGATCCATCATCCAGTCATGGATTTTGCAAGGCAAAGTATATGTCAATGGGAAGGTGATAAATAAAGCTGGTACTCCTGTGTCTGAGAAAGCTGTTGTGGAGATAATTGCTGAAGTTCCGAAATATGTATGTAGGGCGGGACATAAGTTGGAAGCTGCCATTGAACAACTTGATGTCAATGTTGCTGGTAAAGTTGCTCTTGATTCTGGGCTGTCAACTGGAGGATTTACTGACTGCTTACTTCAGTATGGCGCATCACATGTTTATGGAGTTGATGTAGGCTATGGACAGGTGGCTGAGAAAATTCGTAGAGATGATCGAGTATCTATTATAGAGCGGACAAATTTAAGATATCTTACAGAACTCCCCCAAAATGTTGATTTGGTGACTTTAGACCTTTCATTCATCTCTATTCTCTTGGTCATGCCTGCTGTGGTTAATGTCATGAAGGAGGATGCAGCCTTAGTAACCTTAGTTAAACCACAATTTGAAGCTCGTAGGTCTCAGGTAGGAAAAGGGGGGATAGTGAAAGATCCTAGTATCCATCAAGAGGTTGGCTACATTATGGGTTTCTGCTCATGTTTTAACAAATTCTCCGTGGACAGTTATTCAAAGGTTCTTGACAGGATTATAAAGGGAGTAGAGGATTTTGGTTTCTGCAGTAAGGGTTGGATTGAGTCCCCTCTCAAAGGTGCTGAGGGTAACACAGAATTCCTTGTTCACTTCACTAGAACCTCAAAATAA 978 0.409 MVLQFLKHPFTISRGFHSDTTLTILSRFPTFNSPVRCVSAQIPTPFKGYATANSEKVLPVKKKKRLDEICLEKYQQYSRSIIQSWILQGKVYVNGKVINKAGTPVSEKAVVEIIAEVPKYVCRAGHKLEAAIEQLDVNVAGKVALDSGLSTGGFTDCLLQYGASHVYGVDVGYGQVAEKIRRDDRVSIIERTNLRYLTELPQNVDLVTLDLSFISILLVMPAVVNVMKEDAALVTLVKPQFEARRSQVGKGGIVKDPSIHQEVGYIMGFCSCFNKFSVDSYSKVLDRIIKGVEDFGFCSKGWIESPLKGAEGNTEFLVHFTRTSK* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0121 325 ProSiteProfiles S4 RNA-binding domain profile. 64 124 - -
Ahy2g0121 325 SMART s4_6 64 129 IPR002942 GO:0003723
Ahy2g0121 325 PANTHER BACTERIAL HEMOLYSIN-LIKE PROTEIN 60 324 - -
Ahy2g0121 325 Gene3D - 53 120 IPR036986 GO:0003723
Ahy2g0121 325 Pfam S4 domain 65 111 IPR002942 GO:0003723
Ahy2g0121 325 Gene3D Vaccinia Virus protein VP39 281 325 IPR029063 -
Ahy2g0121 325 TIGRFAM tly: TlyA family rRNA methyltransferase/putative hemolysin 65 263 IPR004538 GO:0003723
Ahy2g0121 325 Gene3D Vaccinia Virus protein VP39 123 280 IPR029063 -
Ahy2g0121 325 CDD AdoMet_MTases 145 224 - -
Ahy2g0121 325 Pfam FtsJ-like methyltransferase 120 319 IPR002877 GO:0008168|GO:0032259
Ahy2g0121 325 PANTHER BACTERIAL HEMOLYSIN-LIKE PROTEIN 60 324 IPR004538 GO:0003723
Ahy2g0121 325 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 76 320 IPR029063 -
Ahy2g0121 325 CDD S4 64 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0121 Ahy-Chr2 1326292 1333569 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0121 K06442 - gmx:100781303 496.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g0776 19 11167121 11172782 Ahy2g0121 2 1326292 1333569 hybridization