Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0776 ATGGTGTTACAGTTTCTGAAGCATCCTTTCACCATCTCTCGAGTTAGATGTGTCAGCGCTCAAATTCCAACTCCATTTAAGGGATATGCTACTGCGAATTCAGAAAAGGTTTTACCTGTGAAGAAGAAAAAGAGGCTTGATGAAATATGTCTTGAAAAATATCAGCAATATAGCAGATCTATCATCCAGTCATGGATTTTGCAAGGCAAAGTACATGTCAATGGGAAGGTGGTAAATAAAGCTGGTACTCCTGTGTCTGAAAAAGCTGTTGTTGAGATAATTGCCGAAGTTCCGAAATATGTATGTAGGGCGGGACATAAGTTGGAAGCTGCCATTGAACAACTTGGTGTCAATGTTGCTGGTAAAGTTGCTCTTGATTCTGGGCTGTCAACTGGAGGATTTACTGACTGCTTACTTCAGTATGGCGCATCACATGTTTATGGAGTTGATGTAGGCTATGGACAGGTGGCTGAGAAAATTCGTAGAGATGATCGAGTATCTATTATAGAGCGGACAAATTTAAGATATCTTACAGAACTCCCCCAAAATGTTGATTTGGTGACTTTAGACCTTTCATTCATCTCTATTCTCTTGGTCATGCCTGCTGTGGTTAATGTCATGAAGGAGGATGCAGCCTTAGTAACCTTAGTTAAACCACAATTTGAAGCTCGTAGGTCTCAGGTAGGAAAAGGGGGGATAGTGAAAGATCCTAGTATCCATCAAGAGGTTCTTGACAGGATTATAAAGGGAGTAGAGGATTTTGGTTTCTGCAGTAAGGGTTGGATTGAGTCCCCTCTCAAAGGTGCTGAGGGTAACACAGAATTCCTTGTTCACTTCACTAGAACCCCAAAATAA 855 0.4117 MVLQFLKHPFTISRVRCVSAQIPTPFKGYATANSEKVLPVKKKKRLDEICLEKYQQYSRSIIQSWILQGKVHVNGKVVNKAGTPVSEKAVVEIIAEVPKYVCRAGHKLEAAIEQLGVNVAGKVALDSGLSTGGFTDCLLQYGASHVYGVDVGYGQVAEKIRRDDRVSIIERTNLRYLTELPQNVDLVTLDLSFISILLVMPAVVNVMKEDAALVTLVKPQFEARRSQVGKGGIVKDPSIHQEVLDRIIKGVEDFGFCSKGWIESPLKGAEGNTEFLVHFTRTPK* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0776 284 TIGRFAM tly: TlyA family rRNA methyltransferase/putative hemolysin 45 274 IPR004538 GO:0003723
Ahy19g0776 284 PANTHER BACTERIAL HEMOLYSIN-LIKE PROTEIN 40 283 - -
Ahy19g0776 284 PANTHER BACTERIAL HEMOLYSIN-LIKE PROTEIN 40 283 IPR004538 GO:0003723
Ahy19g0776 284 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 100 281 IPR029063 -
Ahy19g0776 284 PIRSF TlyA 39 284 IPR004538 GO:0003723
Ahy19g0776 284 ProSiteProfiles S4 RNA-binding domain profile. 44 104 - -
Ahy19g0776 284 Gene3D Vaccinia Virus protein VP39 103 284 IPR029063 -
Ahy19g0776 284 SUPERFAMILY Alpha-L RNA-binding motif 43 96 - -
Ahy19g0776 284 SMART s4_6 44 109 IPR002942 GO:0003723
Ahy19g0776 284 CDD AdoMet_MTases 125 204 - -
Ahy19g0776 284 Pfam FtsJ-like methyltransferase 100 278 IPR002877 GO:0008168|GO:0032259
Ahy19g0776 284 Gene3D - 34 100 IPR036986 GO:0003723
Ahy19g0776 284 CDD S4 44 93 - -
Ahy19g0776 284 Pfam S4 domain 45 91 IPR002942 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0776 Ahy-Chr19 11167121 11172782 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0776 K06442 - gmx:100781303 476.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g0776 19 11167121 11172782 Ahy2g0121 2 1326292 1333569 hybridization