Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0044 ATGTTCTTCAAATCCCATTGCAAAAAACAGTTCCTTTTCCCTCCAACACTTTTCTCATTTGTAACTCAATGCTTCAGTAACTATTCTCATGAACCACATCCATGTAATCATTCCCTTAGCAGACTCAAAGCTTTTGTTCCAATCCCTAATGAACCTAACTTTAGGGACCCTGAAATTGTTCATTTGTTTTGTGCTAAAGCCCTCAAAGTTGCTGCTATAAGGGCTTTTCTCCCTGAAGGGAAACAGTTGCATGCCCATTTGATAAAGTTTGGTTTTTGTCATGTTCTGTCATTGCAAAATCAGTTCTTGAGTATTTACCTTAAATGCAAGGAAACCAAAGAAGCACTTAAACTGTTTGATGAATTGCCTGGGAGAAATGTGGTCTCGTGGAATATCGTGATCCGTGGCATTGTTGGATGTGGAAATGAAAATGACTTGAATCCTCATCTGGGGTTTTCTTATTTCAAGCGGATGTTGTTCGAAAAGGTGGCTCCGGATGATATAACATTGAATGCTTTGATTGGTGTGTGTGCAAAGCTTCATGATATCGAAATTGGAGTACAACTGCACTGTTTTGCAATGAAAAGAGGACTTGATTTGGATTGTTTTGTAGGTAGTGCTTTGGTTGATTTTTACGCAAAATTTGGTTTGGTTGAGAATTCAAGGAAGGTTTTTTGTGCTGTTACACATAGAGATTTGGTTATGTTGAATGTCATGATTTCTTGTTATGCCCTGAATTGTTTACCAGAAGAGGCCTTCAGGATTTTCAACTCAATGAGATCGGGTGGTGCTAATGGCGACGAATTCACTTTTAGCAGCCTGCTAAGTATATGTGATATTTTAGAATATTATGATTTTGGAAAGCAAGCTCATAGTCTTATTCTGAAACTGTCATTTGAATCCGATATTCTAGTGGCGAGTGCATTAATCAATATGTACGCAAAAAATGAAGATGTCATTGATGCAAAGAGAGTATTTGACAAGATGGCGATTCAAAATGTTGTGGCATGGAATACCATGATTGTTGGGTGTGGAAATAATGGCGAAGTGATTGATGTTATGAAGATTCTCAGAGATATGTTACTCGAAGGAATTTTCCCCGATGAACTCACTATTTCCAGCGTTCTTAGCTCGTGCGGCTATGCTTCTGCCATAACTGAAACTCAGCAAGCTCATGCCTTAGCAGTTAAGCTGTCATTTCAAGAATTTTTATCTGTTTCCAATTCTTTGATTACTGCATACTCCAAGTGTGGTAACATAACTAATGCATTCAAATGCTTCAGATTGATGTTAGAACCTGATCTTGTTACATACACTTCACTGATAAATGCATATGCATTCCATGGTCTTGGCAAAGAAGCAATTGAGATGTTTCAGAAGATGATATCTTGCGGCATAAAACCTGACCGGATTTCTTTTCTTGGCATTCTCTCTGCTTGTGTGCATTGTGGATTCGTGAACGCAGGACTGCACTACTTCAAATTAATGACAGATGTGTATCATATTATTCCTGATTCAGATCACTATACTTGCCTTATTGATCTCCTTGGAAGACATGGTTTCATAAGCGAAGCCTTTGAATTCTTGAAATCAATTCCAATTCAAGCTGAATCGAACATGTTAGGAGCATTCATTGGGTCTTGTAAACTTCATGAAAATATAGAACTGGCTAAATCAGCAGCAGGAAAGCTTTTTGCCATAGAGCCAGAGAAGATTGTGAACTATGCTGTCATGGCTAACATTTATGCTTCTCATAATCACTGGCTTGATGCCGAAAGAGTTCGAAAAACCATGAGGGACAAGAATGTTGCTAAATTCCCAGGCTGTAGCTGGATACAGGTTGGTAATCAAGTTCATTCATTTGTGTCTAGTGATAAGGTTGCTCACAATGGATACGGTCAACCGGGTCTTGGGCAAGACACTTGGCCCTGA 1932 0.3877 MFFKSHCKKQFLFPPTLFSFVTQCFSNYSHEPHPCNHSLSRLKAFVPIPNEPNFRDPEIVHLFCAKALKVAAIRAFLPEGKQLHAHLIKFGFCHVLSLQNQFLSIYLKCKETKEALKLFDELPGRNVVSWNIVIRGIVGCGNENDLNPHLGFSYFKRMLFEKVAPDDITLNALIGVCAKLHDIEIGVQLHCFAMKRGLDLDCFVGSALVDFYAKFGLVENSRKVFCAVTHRDLVMLNVMISCYALNCLPEEAFRIFNSMRSGGANGDEFTFSSLLSICDILEYYDFGKQAHSLILKLSFESDILVASALINMYAKNEDVIDAKRVFDKMAIQNVVAWNTMIVGCGNNGEVIDVMKILRDMLLEGIFPDELTISSVLSSCGYASAITETQQAHALAVKLSFQEFLSVSNSLITAYSKCGNITNAFKCFRLMLEPDLVTYTSLINAYAFHGLGKEAIEMFQKMISCGIKPDRISFLGILSACVHCGFVNAGLHYFKLMTDVYHIIPDSDHYTCLIDLLGRHGFISEAFEFLKSIPIQAESNMLGAFIGSCKLHENIELAKSAAGKLFAIEPEKIVNYAVMANIYASHNHWLDAERVRKTMRDKNVAKFPGCSWIQVGNQVHSFVSSDKVAHNGYGQPGLGQDTWP* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0044 643 TIGRFAM PPR: pentatricopeptide repeat domain 335 369 IPR002885 -
Ahy2g0044 643 TIGRFAM PPR: pentatricopeptide repeat domain 235 263 IPR002885 -
Ahy2g0044 643 TIGRFAM PPR: pentatricopeptide repeat domain 436 469 IPR002885 -
Ahy2g0044 643 Gene3D Tetratricopeptide repeat domain 286 397 IPR011990 GO:0005515
Ahy2g0044 643 Gene3D Tetratricopeptide repeat domain 186 285 IPR011990 GO:0005515
Ahy2g0044 643 Pfam PPR repeat 102 126 IPR002885 -
Ahy2g0044 643 Pfam PPR repeat 508 531 IPR002885 -
Ahy2g0044 643 Pfam PPR repeat 307 329 IPR002885 -
Ahy2g0044 643 Pfam PPR repeat 408 432 IPR002885 -
Ahy2g0044 643 Gene3D Tetratricopeptide repeat domain 57 185 IPR011990 GO:0005515
Ahy2g0044 643 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 434 468 IPR002885 -
Ahy2g0044 643 PANTHER OS07G0259400 PROTEIN 52 632 - -
Ahy2g0044 643 PANTHER OS07G0578800 PROTEIN-RELATED 52 632 IPR045215 GO:0003723|GO:0009451
Ahy2g0044 643 Gene3D Tetratricopeptide repeat domain 404 634 IPR011990 GO:0005515
Ahy2g0044 643 Pfam PPR repeat family 232 276 IPR002885 -
Ahy2g0044 643 Pfam PPR repeat family 333 379 IPR002885 -
Ahy2g0044 643 Pfam PPR repeat family 433 481 IPR002885 -
Ahy2g0044 643 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 333 367 IPR002885 -
Ahy2g0044 643 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 232 266 IPR002885 -
Ahy2g0044 643 Pfam E motif 551 613 IPR046848 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0044 Ahy-Chr2 470174 474374 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g0044 70 632 Glycoside Hydrolase AT3G49170 32.582 5.89e-102 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0044 - - gmx:100778378 902.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0081 12 1830251 1834058 Ahy2g0044 2 470174 474374 hybridization