Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2628 ATGGTGAAGATTTGCTGCATTGGGGCTGGATATGTTGGGGGTCCTACAATGGCAGTGATTGCACTTAAGTGCCCGTCAATTGAGGTGGCTGTTGTCGATATCTCTAAATCCCGCATTGCAGCCTGGAACAGCGATCAGCTTCCAATATATGAGCCAGGCCTTGACAGTGTGGTAAAGCAATGTCGTGGCAAGAACCTCTTCTTCAGCACTGATGTAGAGAAACATGTATTTGAGGCTGACATAGTATTTGTCTCTGTCAACACCCCAACTAAGACTCGCGGTCTTGGAGCCGGCAAAGCAGCAGATTTGACATATTGGGAGAGTGCAGCTCGTATGATCGCCGACGTCTCTAAGTCAGACAAGATTGTGGTTGAGAAATCTACTGTCCCTGTCAAAACTGCTGAGGCCATAGAAAAAATTCTGACTCACAATGCCAAGGGTATCAACTTCCAGATTCTCTCAAACCCGGAATTCCTTGCCGAGGGAACTGCAATCCAAGATCTTTTCAACCCGGACCGAGTTCTCATTGGAGGCAGGGAGACCCCAGGAGGCCAGAAGGCCATTCAAACATTGAAGGAAGTTTATGCTCATTGGGTTCCTGAGGAGAGGATCCTAACCACAAACCTGTGGTCTGCAGAACTCTCTAAGCTTGCTGCCAATGCTTTCTTGGCCCAAAGGATTTCATCAGTTAACGCCATGTCGGCCCTCTGCGAGGCTACCGGTGCAAATGTTAAACAGGTGTCCTTTGCCGTTGGTACAGACACAAGGATTGGACCTAAGTTCCTCAATGCTAGTGTTGGATTTGGTGGATCCTGCTTCCAGAAAGATATCTTGAACCTTGTTTACATCTGCGAGTGCAATGGCCTTCCGGAGGTGGCAGAGTACTGGAAACAAGTCATCAAGATCAATGATTACCAGAAAAGCCGGTTTGTGAACCGTGTGGTTTCGTCTATGTTTAACACGGTTGCAAACAAGAAGATTGCCATTCTGGGATTTGCATTCAAGAAAGACACTGGAGACACTAGGGAGACACCGGCCATTGATGTGTGCAAGGGGCTACTTGGCGATAAGGCCCGACTGAGCATATACGATCCACAGGTGACCGAGGACCAAATCCAAAGGGATCTGTGGATGAACAAGTTTGATTGGGACCATCCTATCCACCTGCAGCCAACTAGCCCAACAACCGAGAAGAAGGTGAGTGTGGTTTGGGATGCGTATGAGGCAACAAAGGATGCAGATGGTGTTTGCATTCTAACCGAGTGGGATGAGTTCAAGAATCTTGATTATCAGAAGATATATGACAATATGAGGAAACCAGCATTTGTGTTTGATGGAAGGAACATTGTGGATATGGATAAGCTTCGTGAGATTGGATTCATTGTGTACTCAATTGGTAAGCCACTGGATCCATGGCTCAAAGACATGCCTGCTGTGGCCTAA 1443 0.4733 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISKSRIAAWNSDQLPIYEPGLDSVVKQCRGKNLFFSTDVEKHVFEADIVFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNAKGINFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPGGQKAIQTLKEVYAHWVPEERILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGANVKQVSFAVGTDTRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKINDYQKSRFVNRVVSSMFNTVANKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLWMNKFDWDHPIHLQPTSPTTEKKVSVVWDAYEATKDADGVCILTEWDEFKNLDYQKIYDNMRKPAFVFDGRNIVDMDKLREIGFIVYSIGKPLDPWLKDMPAVA* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2628 480 Gene3D - 209 240 - -
Ahy20g2628 480 PIRSF UDPglc_GDPman_dh 2 467 IPR017476 GO:0016616
Ahy20g2628 480 PIRSF UDPglc_DH_euk 1 480 IPR028356 GO:0003979
Ahy20g2628 480 PANTHER UDP-GLUCOSE 6-DEHYDROGENASE 1 480 - -
Ahy20g2628 480 SMART UDPG_MGDP_dh_C_a_2_a 328 452 IPR014027 GO:0016616|GO:0051287
Ahy20g2628 480 Pfam UDP-glucose/GDP-mannose dehydrogenase family, central domain 210 304 IPR014026 GO:0016616|GO:0051287
Ahy20g2628 480 Pfam UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 328 451 IPR014027 GO:0016616|GO:0051287
Ahy20g2628 480 Gene3D - 1 208 - -
Ahy20g2628 480 SUPERFAMILY UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 315 463 IPR036220 -
Ahy20g2628 480 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 214 IPR036291 -
Ahy20g2628 480 TIGRFAM NDP-sugDHase: nucleotide sugar dehydrogenase 3 448 IPR017476 GO:0016616
Ahy20g2628 480 Pfam UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3 184 IPR001732 GO:0016616|GO:0051287
Ahy20g2628 480 PANTHER UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE 1 480 IPR028356 GO:0003979
Ahy20g2628 480 Gene3D - 241 477 - -
Ahy20g2628 480 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 210 309 IPR008927 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2628 Ahy-Chr20 135562302 135565282 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2628 K00012 - gmx:100810907 942.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1808 11 116503066 116508734 Ahy20g2628 20 135562302 135565282 ECH
Ahy20g2628 20 135562302 135565282 Ahy20g2628 20 135562302 135565282 ECH
Ahy20g2628 20 135562302 135565282 Ahy10g2137 10 109683610 109686594 hybridization
Ahy20g2628 20 135562302 135565282 Ahy14g2949 14 138223118 138225968 PCT
Ahy20g2628 20 135562302 135565282 Ahy4g2600 4 123981252 123984164 PCT
Ahy14g2949 14 138223118 138225968 Ahy20g2628 20 135562302 135565282 PCT
Ahy4g2600 4 123981252 123984164 Ahy20g2628 20 135562302 135565282 PCT