Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2137 ATGGTGAAGATTTGCTGCATTGGGGCTGGATATGTTGGGGGTCCTACAATGGCAGTGATTGCACTTAAGTGCCCGTCAATTGAGGTGGCTGTTGTCGATATCTCTAAATCCCGCATTGCAGCCTGGAACAGCGATCAGCTTCCAATATATGAGCCAGGCCTTGACAACGTGGTAAAGCAATGTCGTGGCAAGAACCTCTTCTTCAGCACTGATGTAGAGAAACATGTATTTGAGGCTGACATAGTATTTGTCTCTGTCAACACCCCAACTAAGACTCGCGGTCTTGGAGCCGGCAAAGCAGCAGATTTGACATATTGGGAGAGCGCAGCTCGCATGATCGCCGACGTCTCTAAGTCAGACAAGATTGTGGTTGAGAAATCCACTGTCCCTGTCAAAACTGCTGAGGCCATAGAAAAAATTCTGACTCACAATGCCAAGGGTATCAACTTCCAGATTCTCTCAAACCCGGAATTCCTTGCCGAGGGAACTGCAATCCAAGATCTTTTCAACCCGGACCGAGTTCTCATTGGAGGCAGGGAGACCCCAGGAGGCCAGAAGGCCATTCAAACATTGAAGGAAGTTTATGCTCATTGGGTTCCTGAGGAGAGGATCCTAACCACAAACCTGTGGTCTGCAGAACTCTCTAAGCTTGCTGCCAATGCTTTCTTGGCCCAAAGGATTTCATCAGTTAACGCCATGTCGGCCCTCTGCGAGGCTACCGGTGCAAATGTTAAACAGGTGTCCTTTGCGGTTGGTACAGACACAAGGATTGGACCTAAGTTCCTCAATGCTAGTGTTGGATTTGGTGGATCCTGCTTCCAGAAAGATATCTTGAACCTTGTTTACATCTGCGAGTGCAATGGCCTTCCGGAGGTGGCAGAGTACTGGAAACAAGTCATCAAGATCAATGATTACCAGAAAAGCCGGTTTGTGAACCGTGTGGTTTCGTCTATGTTTAACACGGTTGCAAACAAGAAGATTGCCATTCTGGGATTTGCATTCAAGAAAGACACTGGAGACACTAGGGAGACGCCGGCCATTGATGTGTGCAAGGGGCTACTTGGCGATAAGGCCCGACTGAGCATATATGATCCACAGGTGACCGAGGACCAAATCCAAAGGGATCTGTGGATGAACAAGTTTGATTGGGACCATCCTATCCACCTGCAGCCAACTAGCCCGACAACCGAGAAGAAGGTGAGTGTGGTTTGGGATGCGTATGAGGCAACAAAGGATGCAGATGGTGTTTGCATTCTAACCGAGTGGGATGAGTTCAAGAATCTTGATTATCAGAAGATATATGACAATATGAGGAAACCAGCATTTGTGTTTGATGGAAGGAACATTGTGGATATGGATAAGCTTCGTGAGATTGGATTCATTGTGTACTCAATTGGTAAGCCACTGGATCCATGGCTCAAAGACATGCCTGCTGTGGCCTAA 1443 0.4761 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISKSRIAAWNSDQLPIYEPGLDNVVKQCRGKNLFFSTDVEKHVFEADIVFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNAKGINFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPGGQKAIQTLKEVYAHWVPEERILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGANVKQVSFAVGTDTRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKINDYQKSRFVNRVVSSMFNTVANKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLWMNKFDWDHPIHLQPTSPTTEKKVSVVWDAYEATKDADGVCILTEWDEFKNLDYQKIYDNMRKPAFVFDGRNIVDMDKLREIGFIVYSIGKPLDPWLKDMPAVA* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2137 480 Gene3D - 209 240 - -
Ahy10g2137 480 PANTHER UDP-GLUCOSE 6-DEHYDROGENASE 1 480 - -
Ahy10g2137 480 SMART UDPG_MGDP_dh_C_a_2_a 328 452 IPR014027 GO:0016616|GO:0051287
Ahy10g2137 480 PIRSF UDPglc_DH_euk 1 480 IPR028356 GO:0003979
Ahy10g2137 480 TIGRFAM NDP-sugDHase: nucleotide sugar dehydrogenase 3 448 IPR017476 GO:0016616
Ahy10g2137 480 Pfam UDP-glucose/GDP-mannose dehydrogenase family, central domain 210 304 IPR014026 GO:0016616|GO:0051287
Ahy10g2137 480 Pfam UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3 184 IPR001732 GO:0016616|GO:0051287
Ahy10g2137 480 Pfam UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 328 451 IPR014027 GO:0016616|GO:0051287
Ahy10g2137 480 Gene3D - 1 208 - -
Ahy10g2137 480 SUPERFAMILY UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 315 463 IPR036220 -
Ahy10g2137 480 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 214 IPR036291 -
Ahy10g2137 480 PIRSF UDPglc_GDPman_dh 2 467 IPR017476 GO:0016616
Ahy10g2137 480 PANTHER UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE 1 480 IPR028356 GO:0003979
Ahy10g2137 480 Gene3D - 241 477 - -
Ahy10g2137 480 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 210 309 IPR008927 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2137 Ahy-Chr10 109683610 109686594 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g2137 K00012 - gmx:100810907 942.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2628 20 135562302 135565282 Ahy10g2137 10 109683610 109686594 hybridization
Ahy10g2137 10 109683610 109686594 Ahy14g2949 14 138223118 138225968 PCT
Ahy10g2137 10 109683610 109686594 Ahy4g2600 4 123981252 123984164 PCT
Ahy14g2949 14 138223118 138225968 Ahy10g2137 10 109683610 109686594 PCT
Ahy4g2600 4 123981252 123984164 Ahy10g2137 10 109683610 109686594 PCT