Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2542 ATGGCCAAGTCTAAGTTCCTTCCTGTTTTCATCTTGGCCCTCATTGTCATTTCCATGCTTCAAACTGTGGTCATGGCATCTCATGGGCATGGAGGACACCATTACAATGACCAGAGGAAATATGGACCTGGCAGTCTCAAGAGCTACCAATGCCCATCAAAATGTTCAACAAGGTGCAGTAGGACCCAATACCACAAGCCGTGCATGTTTTTCTGTCAGAAGTGCTGTAACAAGTGCCTCTGTGTTCCCCCGGGGTATTATGGGAACAAAGCTGTCTGCCCCTGCTACAACAACTGGAAGACCAAGGAAGGAGGACCAAAATGCCCTTAA 330 0.4788 MAKSKFLPVFILALIVISMLQTVVMASHGHGGHHYNDQRKYGPGSLKSYQCPSKCSTRCSRTQYHKPCMFFCQKCCNKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2542 109 PANTHER GIBBERELLIN-REGULATED FAMILY PROTEIN 1 109 - -
Ahy20g2542 109 Pfam Gibberellin regulated protein 50 109 IPR003854 -
Ahy20g2542 109 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 1 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2542 Ahy-Chr20 133819899 133822944 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2542 - - gmx:100305480 220.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2542 20 133819899 133822944 Ahy20g2542 20 133819899 133822944 ECH
Ahy20g2542 20 133819899 133822944 Ahy10g2057 10 108493844 108496853 hybridization
Ahy20g2542 20 133819899 133822944 Ahy14g2882 14 137482644 137484394 PCT
Ahy20g2542 20 133819899 133822944 Ahy4g2532 4 123175706 123177441 PCT
Ahy14g2882 14 137482644 137484394 Ahy20g2542 20 133819899 133822944 PCT
Ahy4g2532 4 123175706 123177441 Ahy20g2542 20 133819899 133822944 PCT